RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857143" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA857143 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
843206 843206 PRJNA857143_S_NODE_141561_length_273_cov_1.830000_g140468_i0 PRJNA857143 141561 273 1.83 4.9959 Betapolyomavirus macacae 1891767 Viruses Viruses 132 3.1300000000000003e-26   NTclustered gi|156598992|gb|EF579658.1| 1891767 g140468 i0 83.784 0.542124542124542 148 15 54 3 126 273 2476 2614 Simian virus 40 isolate SV40(Ad)191, complete genome blastn 148 132 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
5947049 5947049 PRJNA857143_S_NODE_194285_length_242_cov_1.337278_g193192_i0 PRJNA857143 194285 242 1.337278 3.23621276 Betapolyomavirus macacae 1891767 Viruses Viruses 91.6 4.62e-14   NTclustered gi|15705935|gb|AF416237.1|AF416237 1891767 g193192 i0 91.045 0.276859504132231 67 6 28 0 27 93 156 222 Simian virus 40 clone G14M12 non-archetypal regulatory sequence blastn 67 91.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30853101 30853101 PRJNA857143_S_NODE_191834_length_243_cov_1.376471_g190741_i0 PRJNA857143 191834 243 1.376471 3.34482453 Viruses 10239 Viruses Viruses 83.2 5.88e-17   NR QTE03356.1 2815032 g190741 i0 40.7 2 81 48 100 0 243 1 102 182 QTE03356.1 MAG: replication-associated protein [Emberiza rustica CRESS-DNA-virus sp.] diamond 486 84 0.990476190476191 Viruses   Shotokuvirae Cressdnaviricota         Emberiza rustica CRESS-DNA-virus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;