contig_metadata
8 rows where bioproject = "PRJNA857143", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10163822 | 10163822 | PRJNA857143_S_NODE_145208_length_270_cov_1.984772_g144115_i0 | PRJNA857143 | 145208 | 270 | 1.984772 | 5.3588844 | Bdellovibrio sp. KM | 28201 | Bacteria | Bacteria | 151 | 8.939999999999999e-45 | NR | WP_181606074.1 | 2748865 | g144115 | i0 | 78.2 | 4.82222222222222 | 87 | 19 | 96.7 | 0 | 262 | 2 | 19 | 105 | WP_181606074.1 glutathione peroxidase [Bdellovibrio sp. KM01] | diamond | 1302 | 151 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. KM01 | ||
| 17812745 | 17812745 | PRJNA857143_S_NODE_129894_length_283_cov_1.857143_g128801_i0 | PRJNA857143 | 129894 | 283 | 1.857143 | 5.25571469 | Bacteriovorax | 146784 | Bacteria | Bacteria | 468 | 2.19e-127 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g128801 | i0 | 96.466 | 309.360424028269 | 283 | 10 | 100 | 0 | 1 | 283 | 1661300 | 1661018 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 87549 | 468 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 22520961 | 22520961 | PRJNA857143_S_NODE_60658_length_372_cov_2.244147_g59565_i0 | PRJNA857143 | 60658 | 372 | 2.244147 | 8.34822684 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 126 | 6.699999999999999e-32 | NR | PIP95421.1 | 1975529 | g59565 | i0 | 72.9 | 2.78225806451613 | 85 | 23 | 68.5 | 0 | 372 | 118 | 321 | 405 | PIP95421.1 MAG: isocitrate dehydrogenase (NADP(+)) [Bdellovibrio sp. CG22_combo_CG10-13_8_21_14_all_39_27] | diamond | 1035 | 127 | 0.992125984251969 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CG22_combo_CG10-13_8_21_14_all_39_27 | ||
| 26897035 | 26897035 | PRJNA857143_S_NODE_49581_length_397_cov_2.003086_g48488_i0 | PRJNA857143 | 49581 | 397 | 2.003086 | 7.95225142 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 70.9 | 2.81e-11 | NR | PZO79293.1 | 349221 | g48488 | i0 | 44.2 | 0.717884130982368 | 95 | 42 | 70.3 | 4 | 329 | 51 | 351 | 436 | PZO79293.1 MAG: hypothetical protein DI626_11630 [Micavibrio aeruginosavorus] | diamond | 285 | 70.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 28981621 | 28981621 | PRJNA857143_S_NODE_100408_length_313_cov_0.954167_g99315_i0 | PRJNA857143 | 100408 | 313 | 0.954167 | 2.98654271 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 95.9 | 1.95e-20 | NR | MBS1969835.1 | 2053517 | g99315 | i0 | 91.3 | 0.440894568690096 | 46 | 4 | 44.1 | 0 | 313 | 176 | 1429 | 1474 | MBS1969835.1 endonuclease/exonuclease/phosphatase family protein [Bdellovibrionales bacterium] | diamond | 138 | 95.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29518099 | 29518099 | PRJNA857143_S_NODE_159270_length_259_cov_4.575269_g158177_i0 | PRJNA857143 | 159270 | 259 | 4.575269 | 11.84994671 | Bdellovibrio sp. 28-41-41 | 1970323 | Bacteria | Bacteria | 158 | 3.2e-47 | NR | OYZ21784.1 | 1970323 | g158177 | i0 | 84.9 | 0.996138996138996 | 86 | 13 | 99.6 | 0 | 1 | 258 | 71 | 156 | OYZ21784.1 MAG: hypothetical protein B7Y39_08430 [Bdellovibrio sp. 28-41-41] | diamond | 258 | 158 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 28-41-41 | ||
| 31698561 | 31698561 | PRJNA857143_S_NODE_138077_length_276_cov_1.541872_g136984_i0 | PRJNA857143 | 138077 | 276 | 1.541872 | 4.25556672 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 75.5 | 1.71e-13 | NR | MBS1969835.1 | 2053517 | g136984 | i0 | 54.4 | 0.739130434782609 | 68 | 31 | 73.9 | 0 | 3 | 206 | 1400 | 1467 | MBS1969835.1 endonuclease/exonuclease/phosphatase family protein [Bdellovibrionales bacterium] | diamond | 204 | 75.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32836177 | 32836177 | PRJNA857143_S_NODE_76900_length_343_cov_2.311111_g75807_i0 | PRJNA857143 | 76900 | 343 | 2.311111 | 7.92711073 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 48.9 | 7.58e-4 | NR | HEU4839277.1 | 2024841 | g75807 | i0 | 44.9 | 0.428571428571429 | 49 | 25 | 42.9 | 1 | 1 | 147 | 244 | 290 | HEU4839277.1 thrombospondin type-1 domain-containing protein [Micavibrio sp.] | diamond | 147 | 48.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;