RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857143" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA857143 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29234096 29234096 PRJNA857143_S_NODE_141349_length_273_cov_2.340000_g140256_i0 PRJNA857143 141349 273 2.34 6.3882 Candidatus Woesearchaeota archaeon CG1 2026803 Archaea Archaea 67.4 1.13e-11   NR PIN74268.1 1974465 g140256 i0 57.7 1.87912087912088 52 21 57.1 1 4 159 99 149 PIN74268.1 MAG: hypothetical protein COV20_01475 [Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_45_16] diamond 513 67.4 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_45_16
29305249 29305249 PRJNA857143_S_NODE_42069_length_418_cov_1.710145_g40976_i0 PRJNA857143 42069 418 1.710145 7.1484061 Nanobdellati 1783276 Archaea Archaea 57 1.86e-6   NR MBS3144747.1 2026803 g40976 i0 42 3.76794258373206 69 39 48.8 1 334 131 149 217 MBS3144747.1 rhodanese-related sulfurtransferase [Candidatus Woesearchaeota archaeon] diamond 1575 57 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32521464 32521464 PRJNA857143_S_NODE_153699_length_264_cov_1.225131_g152606_i0 PRJNA857143 153699 264 1.225131 3.23434584 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 72 2.32e-12   NR MBI4149494.1 2026803 g152606 i0 68.8 1.09090909090909 48 15 54.5 0 2 145 519 566 MBI4149494.1 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 [Candidatus Woesearchaeota archaeon] diamond 288 72 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;