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contig_metadata

4 rows where bioproject = "PRJNA857143", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA857143 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11438997 11438997 PRJNA857143_S_NODE_127409_length_285_cov_2.867925_g126316_i0 PRJNA857143 127409 285 2.867925 8.17358625 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 144 5.85e-39   NR HCM42264.1 2035772 g126316 i0 80.9 4.91578947368421 94 18 98.9 0 4 285 30 123 HCM42264.1 phosphopyruvate hydratase [Candidatus Omnitrophota bacterium] diamond 1401 144 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
13597332 13597332 PRJNA857143_S_NODE_176031_length_250_cov_0.988701_g174938_i0 PRJNA857143 176031 250 0.988701 2.4717525 Bacteria 2 Bacteria Bacteria 55.5 1.29e-6   NR OGW96658.1 1801839 g174938 i0 57.1 3.864 49 20 58.8 1 246 100 32 79 OGW96658.1 MAG: molecular chaperone DnaJ [Omnitrophica WOR_2 bacterium GWA2_45_18] diamond 966 55.8 0.99462365591397806 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium GWA2_45_18
30403069 30403069 PRJNA857143_S_NODE_69313_length_356_cov_1.102473_g68220_i0 PRJNA857143 69313 356 1.102473 3.92480388 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52 1.44e-5   NR MCX5707306.1 2035772 g68220 i0 46.7 0.758426966292135 45 24 37.9 0 14 148 86 130 MCX5707306.1 protease inhibitor I42 family protein [Candidatus Omnitrophota bacterium] diamond 270 52 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32086372 32086372 PRJNA857143_S_NODE_170558_length_252_cov_1.743017_g169465_i0 PRJNA857143 170558 252 1.743017 4.39240284 Pseudomonadati 3379134 Bacteria Bacteria 59.7 4.57e-8   NR MDP3919846.1 2035772 g169465 i0 60 2.67857142857143 45 18 53.6 0 252 118 847 891 MDP3919846.1 aconitate hydratase AcnA [Candidatus Omnitrophota bacterium] diamond 675 59.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;