RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA857143", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA857143 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19086838 19086838 PRJNA857143_S_NODE_23815_length_501_cov_4.408879_g22728_i0 PRJNA857143 23815 501 4.408879 22.08848379 Candidatus Aminicenantaceae bacterium 3104267 Bacteria Bacteria 127 6.46e-34   NR MEE8605158.1 3104267 g22728 i0 75.3 9.52694610778443 77 19 46.1 0 499 269 74 150 MEE8605158.1 EF-Tu/IF-2/RF-3 family GTPase [Candidatus Aminicenantaceae bacterium] diamond 4773 127 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales Candidatus Aminicenantaceae   Candidatus Aminicenantaceae bacterium
28160686 28160686 PRJNA857143_S_NODE_125005_length_288_cov_0.883721_g123912_i0 PRJNA857143 125005 288 0.883721 2.54511648 Candidatus Saccharicenans sp. 2819258 Bacteria Bacteria 44.7 0.0137   NR MBP7794048.1 2819258 g123912 i0 39.4 3.04166666666667 71 29 74 1 1 213 684 740 MBP7794048.1 hypothetical protein [Candidatus Saccharicenans sp.] diamond 876 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales Candidatus Saccharicenantaceae Candidatus Saccharicenans Candidatus Saccharicenans sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;