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contig_metadata

18 rows where bioproject = "PRJNA857143", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 18 ✖

tax_clade 1

  • Apusozoa · 18 ✖

bioproject 1

  • PRJNA857143 · 18 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2119296 2119296 PRJNA857143_S_NODE_21882_length_515_cov_27.176471_g20796_i0 PRJNA857143 21882 515 27.176471 139.95882565 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 227 3.5399999999999996e-72   NR XP_013754328.1 461836 g20796 i0 71.1 3.47766990291262 149 42 86.2 1 4 447 94 242 XP_013754328.1 60S ribosomal protein L7 [Thecamonas trahens ATCC 50062] diamond 1791 227 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5947471 5947471 PRJNA857143_S_NODE_58945_length_375_cov_4.741722_g57852_i0 PRJNA857143 58945 375 4.741722 17.7814575 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 153 6.85e-44   NR XP_013754328.1 461836 g57852 i0 62.6 1.84 115 42 91.2 1 374 33 127 241 XP_013754328.1 60S ribosomal protein L7 [Thecamonas trahens ATCC 50062] diamond 690 153 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
7222062 7222062 PRJNA857143_S_NODE_24846_length_494_cov_19.313539_g23757_i0 PRJNA857143 24846 494 19.313539 95.40888266 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 131 4.37e-36   NR XP_013758175.1 461836 g23757 i0 65 11.1801619433198 103 36 62.6 0 31 339 4 106 XP_013758175.1 small subunit ribosomal protein S24e [Thecamonas trahens ATCC 50062] diamond 5523 132 0.992424242424242 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12322708 12322708 PRJNA857143_S_NODE_16990_length_561_cov_37.471311_g15924_i0 PRJNA857143 16990 561 37.471311 210.21405471 Podomonas magna 2925398 Root_unresolved Root_unresolved 207 1.11e-48   NTclustered gi|2206682163|gb|OM966636.1| 2925398 g15924 i0 87.363 37.7344028520499 182 21 32 2 1 182 5809 5988 Podomonas magna strain CCAP19014 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21169 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas magna
14872582 14872582 PRJNA857143_S_NODE_96152_length_317_cov_3.450820_g95059_i0 PRJNA857143 96152 317 3.45082 10.9390994 Thecamonas trahens 529818 Root_unresolved Root_unresolved 69.4 2.95e-7   NTclustered gi|923135822|ref|XM_013905923.1| 461836 g95059 i0 97.5 0.236593059936909 40 1 13 0 226 265 1513 1474 Thecamonas trahens ATCC 50062 phosphatidylinositol 3-and 4-kinase (AMSG_01873), partial mRNA blastn 75 69.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19970166 19970166 PRJNA857143_S_NODE_175996_length_250_cov_1.056497_g174903_i0 PRJNA857143 175996 250 1.056497 2.6412425 Thecamonas trahens 529818 Root_unresolved Root_unresolved 207 4.57e-49   NTclustered gi|761380055|ref|NC_026452.1| 529818 g174903 i0 82.041 87.672 245 42 97 2 1 243 786 542 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 21918 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22520145 22520145 PRJNA857143_S_NODE_161558_length_258_cov_1.264865_g160465_i0 PRJNA857143 161558 258 1.264865 3.2633517 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 1.4e-4   NTclustered gi|923133852|ref|XM_013904938.1| 461836 g160465 i0 100 3.41472868217054 32 0 12 0 49 80 263 232 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_03055), partial mRNA blastn 881 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23795431 23795431 PRJNA857143_S_NODE_142739_length_272_cov_1.959799_g141646_i0 PRJNA857143 142739 272 1.959799 5.33065328 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.1 2.4e-9   NR XP_013760378.1 461836 g141646 i0 47.3 0.606617647058823 55 26 60.7 1 2 166 45 96 XP_013760378.1 uncharacterized protein AMSG_03040 [Thecamonas trahens ATCC 50062] diamond 165 60.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27149442 27149442 PRJNA857143_S_NODE_118182_length_294_cov_1.710407_g117089_i0 PRJNA857143 118182 294 1.710407 5.02859658 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.1 8.87e-4   NR XP_013754456.1 461836 g117089 i0 31.6 0.775510204081633 76 47 77.6 1 294 67 644 714 XP_013754456.1 uncharacterized protein AMSG_08923 [Thecamonas trahens ATCC 50062] diamond 228 48.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27212918 27212918 PRJNA857143_S_NODE_123842_length_289_cov_1.083333_g122749_i0 PRJNA857143 123842 289 1.083333 3.13083237 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 69.7 2.1e-11   NR XP_013759472.1 461836 g122749 i0 47.3 0.768166089965398 74 39 76.8 0 61 282 422 495 XP_013759472.1 major facilitator superfamily transporter MFS_1 [Thecamonas trahens ATCC 50062] diamond 222 69.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27276419 27276419 PRJNA857143_S_NODE_189743_length_244_cov_1.157895_g188650_i0 PRJNA857143 189743 244 1.157895 2.8252638 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 68.6 8.63e-12   NR XP_013753014.1 461836 g188650 i0 47.2 0.885245901639344 72 36 88.5 2 16 231 152 221 XP_013753014.1 uncharacterized protein AMSG_11038 [Thecamonas trahens ATCC 50062] diamond 216 68.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27308116 27308116 PRJNA857143_S_NODE_19023_length_540_cov_3.310493_g17946_i0 PRJNA857143 19023 540 3.310493 17.8766622 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.8 4.4899999999999997e-23   NR XP_013758370.1 461836 g17946 i0 42.1 0.672222222222222 121 70 67.2 0 11 373 28 148 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 363 99.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27718902 27718902 PRJNA857143_S_NODE_26844_length_482_cov_6.520782_g25752_i0 PRJNA857143 26844 482 6.520782 31.43016924 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 112 6.53e-28   NR XP_013758125.1 461836 g25752 i0 54.5 0.628630705394191 101 46 62.9 0 480 178 93 193 XP_013758125.1 lipocalin family protein [Thecamonas trahens ATCC 50062] diamond 303 112 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27781740 27781740 PRJNA857143_S_NODE_176264_length_250_cov_0.881356_g175171_i0 PRJNA857143 176264 250 0.881356 2.20339 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 56.2 7.08e-7   NR XP_013757138.1 461836 g175171 i0 49.2 0.78 65 27 78 2 5 199 403 461 XP_013757138.1 serine hydroxymethyltransferase [Thecamonas trahens ATCC 50062] diamond 195 56.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29549558 29549558 PRJNA857143_S_NODE_148710_length_267_cov_5.144330_g147617_i0 PRJNA857143 148710 267 5.14433 13.7353611 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 80.5 1.83e-16   NR XP_013758125.1 461836 g147617 i0 54.3 0.910112359550562 81 35 89.9 2 241 2 27 106 XP_013758125.1 lipocalin family protein [Thecamonas trahens ATCC 50062] diamond 243 80.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29928878 29928878 PRJNA857143_S_NODE_21651_length_517_cov_7.677928_g20566_i0 PRJNA857143 21651 517 7.677928 39.69488776 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 214 7.33e-66   NR XP_013760592.1 461836 g20566 i0 64.2 0.940038684719536 162 55 93.4 2 2 484 181 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 486 214 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30094679 30094679 PRJNA857143_S_NODE_126252_length_286_cov_3.215962_g125159_i0 PRJNA857143 126252 286 3.215962 9.19765132 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 2.23e-7   NR XP_013754463.1 461836 g125159 i0 31.9 3.60839160839161 72 41 67.1 1 17 208 133 204 XP_013754463.1 group XIIA secretory phospholipase A2 [Thecamonas trahens ATCC 50062] diamond 1032 57.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31635231 31635231 PRJNA857143_S_NODE_57896_length_378_cov_1.022951_g56803_i0 PRJNA857143 57896 378 1.022951 3.86675478 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 51.2 1.82e-4   NR XP_013762065.1 461836 g56803 i0 36.8 0.53968253968254 68 42 54 1 375 172 636 702 XP_013762065.1 phospholipase C delta isoform [Thecamonas trahens ATCC 50062] diamond 204 51.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;