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contig_metadata

11 rows where bioproject = "PRJNA855894" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 11 ✖

bioproject 1

  • PRJNA855894 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9770025 9770025 PRJNA855894_P_NODE_19688_length_339_cov_0.928571_g19566_i0 PRJNA855894 19688 339 0.928571 3.14785569 Moss associated narna-like virus 24 3066983 Viruses Viruses 320 7.95e-83   NTclustered gi|2626077281|gb|OQ987521.1| 3066983 g19566 i0 84.226 9.71681415929203 336 46 99 7 4 337 729 1059 MAG: Moss associated narna-like virus 24 isolate DICBIL genomic sequence blastn 3294 320 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Moss associated narna-like virus 24
9770433 9770433 PRJNA855894_P_NODE_48_length_3227_cov_7.572606_g46_i0 PRJNA855894 48 3227 7.572606 244.36799562 RD114 retrovirus 11834 Viruses Viruses 5938 0   NTclustered gi|306482054|dbj|AB559882.1| 11834 g46 i0 99.876 47.4285714285714 3227 4 100 0 1 3227 8197 4971 RD114 retrovirus proviral DNA, complete genome, strain: CRT1 blastn 153052 5938 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus RD114 retrovirus
12321328 12321328 PRJNA855894_P_NODE_25350_length_286_cov_0.981221_g25228_i0 PRJNA855894 25350 286 0.981221 2.80629206 Potexvirus cymbidii 3433819 Viruses Viruses 490 4.729999999999998e-134   NTclustered gi|939193298|gb|KR185347.1| 12178 g25228 i0 97.552 29.8076923076923 286 7 100 0 1 286 3168 2883 Cymbidium mosaic virus isolate China, complete genome blastn 8525 490 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
13595983 13595983 PRJNA855894_P_NODE_29331_length_252_cov_1.290503_g29209_i0 PRJNA855894 29331 252 1.290503 3.25206756 Siphoviridae sp. ctGO42 2827566 Viruses Viruses 344 3.37e-90   NTclustered gi|2051147051|tpg|BK015857.1| 2827566 g29209 i0 91.27 26.7619047619048 252 22 100 0 1 252 31168 31419 MAG TPA_asm: Siphoviridae sp. ctGO42, partial genome blastn 6744 344 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ctGO42
16144609 16144609 PRJNA855894_P_NODE_13_length_4640_cov_6.881979_g12_i0 PRJNA855894 13 4640 6.881979 319.3238256 Potexvirus cymbidii 3433819 Viruses Viruses 8237 0   NTclustered gi|2232046865|gb|MW316659.1| 12178 g12 i0 98.707 32.9838362068966 4641 59 100 1 1 4640 9 4649 Cymbidium mosaic virus isolate Cy1, complete genome blastn 153045 8237 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
16145239 16145239 PRJNA855894_P_NODE_933_length_1555_cov_15.647420_g893_i0 PRJNA855894 933 1555 15.64742 243.317381 Potexvirus cymbidii 3433819 Viruses Viruses 2772 0   NTclustered gi|2700566920|gb|PP481412.1| 12178 g893 i0 98.842 59.9183279742765 1555 18 100 0 1 1555 4852 6406 Cymbidium mosaic virus isolate IFA191, complete genome blastn 93173 2772 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
19968390 19968390 PRJNA855894_P_NODE_13456_length_423_cov_1.980000_g13334_i0 PRJNA855894 13456 423 1.98 8.3754 Erysiphe necator associated narnavirus 3 2695336 Viruses Viruses 186 8.42e-53   NR QJT93762.1 2736387 g13334 i0 66.7 1 141 46 99.3 1 421 2 340 480 QJT93762.1 RNA-dependent RNA polymerase [Erysiphe necator associated narnavirus 30] diamond 423 186 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Erysiphe necator associated narnavirus 30
21244033 21244033 PRJNA855894_P_NODE_18317_length_354_cov_1.370107_g18195_i0 PRJNA855894 18317 354 1.370107 4.85017878 Potexvirus cymbidii 3433819 Viruses Viruses 621 2.04e-173   NTclustered gi|2520252297|gb|OQ993367.1| 12178 g18195 i0 98.305 37.9774011299435 354 6 100 0 1 354 3695 3342 Cymbidium mosaic virus isolate DSMZ PV-1073, complete genome blastn 13444 621 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
27592333 27592333 PRJNA855894_P_NODE_30364_length_250_cov_0.870056_g30242_i0 PRJNA855894 30364 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 128 2.59e-32   NR XOR08241.1 2832643 g30242 i0 69.5 0.984 82 25 98.4 0 3 248 547 628 XOR08241.1 MAG: putative primase [Caudoviricetes sp.] diamond 246 128 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29391984 29391984 PRJNA855894_P_NODE_2969_length_959_cov_2.811512_g2878_i0 PRJNA855894 2969 959 2.811512 26.96240008 Cryphonectria naterciae splipalmivirus 1 2841740 Viruses Viruses 103 4.3499999999999997e-23   NR BCX55511.1 2841740 g2878 i0 69.7 0.237747653806048 76 22 23.8 1 2 229 82 156 BCX55511.1 hypothetical protein 1 [Cryphonectria naterciae splipalmivirus 1] diamond 228 103 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus cryphonectriae
32804683 32804683 PRJNA855894_P_NODE_17980_length_358_cov_1.533333_g17858_i0 PRJNA855894 17980 358 1.533333 5.48933214 Grapevine wood holobiome associated narna-like virus 18 3398654 Viruses Viruses 78.2 1.98e-15   NR XOD45389.1 3398654 g17858 i0 51.8 1.39106145251397 85 36 67 1 113 352 1 85 XOD45389.1 HP1 [Grapevine wood holobiome associated narna-like virus 18] diamond 498 78.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;