contig_metadata
13 rows where bioproject = "PRJNA855894", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1235042 | 1235042 | PRJNA855894_P_NODE_32081_length_246_cov_0.890173_g31959_i0 | PRJNA855894 | 32081 | 246 | 0.890173 | 2.18982558 | Staphylococcus | 1279 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g31959 | i0 | 99.593 | 98.1544715447154 | 246 | 1 | 100 | 0 | 1 | 246 | 2125659 | 2125414 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 24146 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 2117586 | 2117586 | PRJNA855894_P_NODE_28482_length_259_cov_1.118280_g28360_i0 | PRJNA855894 | 28482 | 259 | 1.11828 | 2.8963452 | Bacillus pseudomycoides | 64104 | Bacteria | Bacteria | 440 | 4.309999999999998e-119 | NTclustered | gi|753704762|gb|CP009651.1| | 64104 | g28360 | i0 | 97.297 | 1205.96525096525 | 259 | 7 | 100 | 0 | 1 | 259 | 2284185 | 2284443 | Bacillus pseudomycoides strain BTZ chromosome, complete genome | blastn | 312345 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus pseudomycoides | ||
| 3393066 | 3393066 | PRJNA855894_P_NODE_34703_length_241_cov_0.916667_g34581_i0 | PRJNA855894 | 34703 | 241 | 0.916667 | 2.20916747 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 433 | 6.63e-117 | NTclustered | gi|2273672934|gb|CP101318.1| | 1282 | g34581 | i0 | 99.17 | 5.63485477178423 | 241 | 1 | 100 | 1 | 1 | 241 | 20109 | 20348 | Staphylococcus epidermidis strain sep1 plasmid pSep1-2, complete sequence | blastn | 1358 | 433 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 3786985 | 3786985 | PRJNA855894_P_NODE_32583_length_245_cov_0.895349_g32461_i0 | PRJNA855894 | 32583 | 245 | 0.895349 | 2.19360505 | Staphylococcus | 1279 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|1042399372|gb|KU555869.1| | 28035 | g32461 | i0 | 99.592 | 519.926530612245 | 245 | 1 | 100 | 0 | 1 | 245 | 944 | 700 | Staphylococcus lugdunensis strain SLG13971-4 16S-23S ribosomal RNA intergenic spacer gene, region | blastn | 127382 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus lugdunensis | ||
| 7613058 | 7613058 | PRJNA855894_P_NODE_33606_length_243_cov_0.905882_g33484_i0 | PRJNA855894 | 33606 | 243 | 0.905882 | 2.20129326 | Staphylococcus | 1279 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2894814215|gb|CP178526.1| | 1292 | g33484 | i0 | 100 | 90.7366255144033 | 243 | 0 | 100 | 0 | 1 | 243 | 393303 | 393061 | Staphylococcus warneri strain X5R13 chromosome, complete genome | blastn | 22049 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 9770373 | 9770373 | PRJNA855894_P_NODE_33508_length_243_cov_0.905882_g33386_i0 | PRJNA855894 | 33508 | 243 | 0.905882 | 2.20129326 | Anoxybacteroides amylolyticum | 294699 | Bacteria | Bacteria | 420 | 5.21e-113 | NTclustered | gi|1024277742|gb|CP015438.1| | 294699 | g33386 | i0 | 98.326 | 773.835390946502 | 239 | 4 | 98 | 0 | 5 | 243 | 33725 | 33963 | Anoxybacteroides amylolyticum strain DSM 15939 chromosome, complete genome | blastn | 188042 | 420 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Anoxybacteroides | Anoxybacteroides amylolyticum | ||
| 10163496 | 10163496 | PRJNA855894_P_NODE_24728_length_291_cov_0.899083_g24606_i0 | PRJNA855894 | 24728 | 291 | 0.899083 | 2.61633153 | Staphylococcus | 1279 | Bacteria | Bacteria | 538 | 1.6999999999999994e-148 | NTclustered | gi|2071692135|gb|CP073824.1| | 1282 | g24606 | i0 | 100 | 545.86941580756 | 291 | 0 | 100 | 0 | 1 | 291 | 700139 | 699849 | Staphylococcus epidermidis strain B1200599 chromosome, complete genome | blastn | 158848 | 538 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12321569 | 12321569 | PRJNA855894_P_NODE_34130_length_242_cov_0.911243_g34008_i0 | PRJNA855894 | 34130 | 242 | 0.911243 | 2.20520806 | Enterococcus casseliflavus | 37734 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1913493076|gb|CP050490.1| | 37734 | g34008 | i0 | 99.587 | 20.8057851239669 | 242 | 1 | 100 | 0 | 1 | 242 | 3017877 | 3018118 | Enterococcus casseliflavus strain EGM182 chromosome, complete genome | blastn | 5035 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 13988839 | 13988839 | PRJNA855894_P_NODE_29851_length_251_cov_0.865169_g29729_i0 | PRJNA855894 | 29851 | 251 | 0.865169 | 2.17157419 | Streptococcus | 1301 | Bacteria | Bacteria | 459 | 1.1499999999999996e-124 | NTclustered | gi|2497261172|gb|OQ876156.1| | 1306 | g29729 | i0 | 99.602 | 100 | 251 | 1 | 100 | 0 | 1 | 251 | 271 | 21 | Streptococcus sp. strain PGM706 16S ribosomal RNA gene, partial sequence | blastn | 25100 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 21637115 | 21637115 | PRJNA855894_P_NODE_34237_length_242_cov_0.911243_g34115_i0 | PRJNA855894 | 34237 | 242 | 0.911243 | 2.20520806 | Lactococcus | 1357 | Bacteria | Bacteria | 279 | 9.19e-71 | NTclustered | gi|2800799246|gb|CP093959.1| | 1358 | g34115 | i0 | 100 | 104.545454545455 | 151 | 0 | 100 | 0 | 1 | 151 | 423965 | 424115 | Lactococcus lactis strain FAM 17919 chromosome, complete genome | blastn | 25300 | 279 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 22912698 | 22912698 | PRJNA855894_P_NODE_32718_length_245_cov_0.895349_g32596_i0 | PRJNA855894 | 32718 | 245 | 0.895349 | 2.19360505 | Streptococcus | 1301 | Bacteria | Bacteria | 446 | 8.68e-121 | NTclustered | gi|1539732945|emb|LR134283.1| | 1328 | g32596 | i0 | 99.59 | 39.6816326530612 | 244 | 1 | 99 | 0 | 1 | 244 | 1316897 | 1316654 | Streptococcus anginosus strain NCTC10713 genome assembly, chromosome: 1 | blastn | 9722 | 448 | 0.995535714285714 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus anginosus | ||
| 25461669 | 25461669 | PRJNA855894_P_NODE_26720_length_274_cov_1.179104_g26598_i0 | PRJNA855894 | 26720 | 274 | 1.179104 | 3.23074496 | Bacillales | 1385 | Bacteria | Bacteria | 289 | 1.76e-73 | NTclustered | gi|961442200|gb|CP013652.1| | 162209 | g26598 | i0 | 89.52 | 744.945255474453 | 229 | 23 | 83 | 1 | 44 | 271 | 1627 | 1399 | Paenibacillus naphthalenovorans strain 32O-Y chromosome, complete genome | blastn | 204115 | 289 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus naphthalenovorans | ||
| 28286563 | 28286563 | PRJNA855894_P_NODE_22986_length_306_cov_1.982833_g22864_i0 | PRJNA855894 | 22986 | 306 | 1.982833 | 6.06746898 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 47 | 1.8e-4 | NR | WP_233005565.1 | 33987 | g22864 | i0 | 66.7 | 0.382352941176471 | 39 | 13 | 38.2 | 0 | 118 | 2 | 26 | 64 | WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum] | diamond | 117 | 47 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;