RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA854078" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA854078 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31888237 31888237 PRJNA854078_P_NODE_7857_length_336_cov_1.034221_g7645_i0 PRJNA854078 7857 336 1.034221 3.47498256 Acrasis kona 1008807 Heterolobosea other_Eukaryota 48.5 0.00108   NR KAL0484320.1 1008807 g7645 i0 53.8 0.348214285714286 39 18 34.8 0 336 220 1602 1640 KAL0484320.1 clathrin heavy chain [Acrasis kona] diamond 117 48.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32402845 32402845 PRJNA854078_P_NODE_16479_length_241_cov_1.821429_g16267_i0 PRJNA854078 16479 241 1.821429 4.38964389 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.8 4.89e-11   NR XP_044544743.1 51637 g16267 i0 38.5 1.9792531120332 78 48 97.1 0 2 235 291 368 XP_044544743.1 uncharacterized protein C9374_009392 [Naegleria lovaniensis] diamond 477 67.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;