RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA854078" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA854078 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11045325 11045325 PRJNA854078_P_NODE_13749_length_253_cov_1.972222_g13537_i0 PRJNA854078 13749 253 1.972222 4.98972166 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 109 1.18e-25   NR CAG9315503.1 1481888 g13537 i0 60.5 1.0197628458498 86 31 99.6 2 1 252 471 555 CAG9315503.1 unnamed protein product [Blepharisma stoltei] diamond 258 109 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
13595411 13595411 PRJNA854078_P_NODE_13651_length_254_cov_1.723757_g13439_i0 PRJNA854078 13651 254 1.723757 4.37834278 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 116 1.4e-28   NR CAI2368680.1 5936 g13439 i0 66.7 1.91338582677165 81 27 95.7 0 252 10 147 227 CAI2368680.1 unnamed protein product [Moneuplotes crassus] diamond 486 116 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
14869588 14869588 PRJNA854078_P_NODE_10972_length_284_cov_2.189573_g10760_i0 PRJNA854078 10972 284 2.189573 6.21838732 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 177 1.22e-52   NR TNV77769.1 5974 g10760 i0 86.2 137.514084507042 94 13 99.3 0 282 1 17 110 TNV77769.1 hypothetical protein FGO68_gene430 [Halteria grandinella] diamond 39054 177 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
14869647 14869647 PRJNA854078_P_NODE_16232_length_242_cov_1.449704_g16020_i0 PRJNA854078 16232 242 1.449704 3.50828368 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 425 1.11e-114   NTclustered gi|512134943|gb|JX178902.1| 1295638 g16020 i0 98.347 100.252066115702 242 4 100 0 1 242 1042 1283 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24261 425 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
27402802 27402802 PRJNA854078_P_NODE_15023_length_247_cov_0.885057_g14811_i0 PRJNA854078 15023 247 0.885057 2.18609079 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 57.4 2.62e-7   NR CAI2359579.1 5936 g14811 i0 38.4 1.04453441295547 86 47 97.2 2 6 245 551 636 CAI2359579.1 unnamed protein product [Moneuplotes crassus] diamond 258 57.4 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
27497516 27497516 PRJNA854078_P_NODE_9403_length_307_cov_1.316239_g9191_i0 PRJNA854078 9403 307 1.316239 4.04085373 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 64.7 3.65e-10   NR KRX02789.1 266149 g9191 i0 35 0.977198697068404 100 65 97.7 0 8 307 15 114 KRX02789.1 hypothetical protein PPERSA_02279 [Pseudocohnilembus persalinus] diamond 300 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
28223455 28223455 PRJNA854078_P_NODE_10526_length_290_cov_1.364055_g10314_i0 PRJNA854078 10526 290 1.364055 3.9557595 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.0477   NR CAD8182443.1 43137 g10314 i0 41.3 0.475862068965517 46 26 47.6 1 196 59 28 72 CAD8182443.1 unnamed protein product [Paramecium octaurelia] diamond 138 41.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
28444804 28444804 PRJNA854078_P_NODE_2406_length_617_cov_1.400735_g2203_i0 PRJNA854078 2406 617 1.400735 8.64253495 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 115 1.48e-26   NR XP_001019547.3 312017 g2203 i0 44.7 4.82333873581848 150 80 71.5 3 444 4 24 173 XP_001019547.3 papain family cysteine protease [Tetrahymena thermophila SB210] diamond 2976 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28579243 28579243 PRJNA854078_P_NODE_5227_length_414_cov_2.302053_g5015_i0 PRJNA854078 5227 414 2.302053 9.53049942 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 0.00111   NR XP_004035812.1 5932 g5015 i0 26.3 3.40579710144928 118 79 80.4 3 49 381 258 374 XP_004035812.1 protein kinase domain protein [Ichthyophthirius multifiliis] diamond 1410 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29234077 29234077 PRJNA854078_P_NODE_14389_length_250_cov_0.870056_g14177_i0 PRJNA854078 14389 250 0.870056 2.17514 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 59.3 5.74e-8   NR CAD8110744.1 65129 g14177 i0 39.5 4.884 81 47 97.2 1 8 250 307 385 CAD8110744.1 unnamed protein product [Paramecium sonneborni] diamond 1221 59.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
31698548 31698548 PRJNA854078_P_NODE_7257_length_350_cov_1.079422_g7045_i0 PRJNA854078 7257 350 1.079422 3.777977 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 76.3 1.59e-13   NR CAD8086221.1 65129 g7045 i0 35 0.882857142857143 103 67 88.3 0 10 318 205 307 CAD8086221.1 unnamed protein product [Paramecium sonneborni] diamond 309 76.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;