RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA854078" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA854078 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26801787 26801787 PRJNA854078_P_NODE_15361_length_246_cov_0.890173_g15149_i0 PRJNA854078 15361 246 0.890173 2.18982558 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 49.7 1.4e-4   NR KAJ5079251.1 1746090 g15149 i0 37 0.98780487804878 81 49 96.3 1 2 238 23 103 KAJ5079251.1 wd repeat-containing protein [Anaeramoeba ignava] diamond 243 49.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28760307 28760307 PRJNA854078_P_NODE_7387_length_346_cov_2.095238_g7175_i0 PRJNA854078 7387 346 2.095238 7.24952348 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 43.1 0.024   NR XP_067766567.1 348837 g7175 i0 31 0.728323699421965 84 56 71.1 1 24 269 12 95 XP_067766567.1 Histone H2A [Spironucleus salmonicida] diamond 252 43.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
31413913 31413913 PRJNA854078_P_NODE_15516_length_245_cov_0.895349_g15304_i0 PRJNA854078 15516 245 0.895349 2.19360505 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 55.5 1.24e-6   NR XP_068364636.1 1144522 g15304 i0 49.1 4.35918367346939 53 27 64.9 0 218 60 362 414 XP_068364636.1 flagellar protofilament ribbon protein [Tritrichomonas foetus] diamond 1068 55.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32023131 32023131 PRJNA854078_P_NODE_4538_length_446_cov_1.541555_g4326_i0 PRJNA854078 4538 446 1.541555 6.8753353 root 1 Root_unresolved Root_unresolved 50.8 4.13e-4   NR XP_068369163.1 1144522 g4326 i0 28.8 1.41928251121076 125 70 76.7 3 396 55 262 378 XP_068369163.1 RAC family serine/threonine-protein kinase like protein [Tritrichomonas foetus] diamond 633 50.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32268208 32268208 PRJNA854078_P_NODE_7358_length_347_cov_1.970803_g7146_i0 PRJNA854078 7358 347 1.970803 6.83868641 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 130 5.979999999999999e-34   NR KAJ3431017.1 1746091 g7146 i0 53 2.98270893371758 115 47 99.4 1 2 346 219 326 KAJ3431017.1 guanine nucleotide-binding protein g(o) subunit alpha [Anaeramoeba flamelloides] diamond 1035 130 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;