RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203" and tax_phylum = "Thermoproteota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA853203 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7219702 7219702 PRJNA853203_P_NODE_43446_length_244_cov_0.912281_g43297_i0 PRJNA853203 43446 244 0.912281 2.22596564 Saccharolobus caldissimus 1702097 Archaea Archaea 52.8 0.022   NTclustered gi|2129441369|dbj|AP025226.1| 1702097 g43297 i0 100 0.114754098360656 28 0 11 0 144 171 1854045 1854018 Saccharolobus caldissimus JCM32116 DNA, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus caldissimus
31413895 31413895 PRJNA853203_P_NODE_28196_length_252_cov_1.385475_g28047_i0 PRJNA853203 28196 252 1.385475 3.491397 Thermoproteota archaeon 2056631 Archaea Archaea 71.6 4.4e-13   NR NLE03261.1 2056631 g28047 i0 48.1 2.79761904761905 77 33 91.7 1 233 3 5 74 NLE03261.1 DNA (cytosine-5-)-methyltransferase [Thermoproteota archaeon] diamond 705 71.6 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;