RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA853203" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9769634 9769634 PRJNA853203_P_NODE_5248_length_331_cov_0.941860_g5099_i0 PRJNA853203 5248 331 0.94186 3.1175566 Protostelium mycophagum 472931 Evosea other_Eukaryota 538 1.9599999999999998e-148   NTclustered gi|262262899|gb|FJ766442.1| 472931 g5099 i0 96.073 54.1570996978852 331 12 100 1 1 331 62 391 Protostelium mycophagum strain TB-A2-1 small subunit ribosomal RNA gene, partial sequence blastn 17926 538 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
19967969 19967969 PRJNA853203_P_NODE_2556_length_402_cov_1.735562_g2409_i0 PRJNA853203 2556 402 1.735562 6.97695924 Grellamoeba robusta 690712 Evosea other_Eukaryota 737 0   NTclustered gi|268549249|gb|GQ438741.1| 690712 g2409 i0 99.751 37.4577114427861 402 1 100 0 1 402 49 450 Amoebozoa sp. 4168 clone 122 small subunit ribosomal RNA gene, partial sequence blastn 15058 737 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Grellamoeba Grellamoeba robusta
31508910 31508910 PRJNA853203_P_NODE_38256_length_247_cov_0.896552_g38107_i0 PRJNA853203 38256 247 0.896552 2.21448344 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 68.6 3.23e-11   NR PRP85918.1 1890364 g38107 i0 47.1 1.05668016194332 87 41 99.6 1 2 247 695 781 PRP85918.1 hypothetical protein PROFUN_06040 [Planoprotostelium fungivorum] diamond 261 68.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;