RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23793736 23793736 PRJNA853203_P_NODE_4199_length_350_cov_1.483755_g4050_i0 PRJNA853203 4199 350 1.483755 5.1931425 Watanabea reniformis 191674 Plants Plants 84.2 1.17e-11   NTclustered gi|2724824652|gb|PP746565.1| 191674 g4050 i0 82.828 18.26 99 11 28 5 76 172 1346 1440 Watanabea reniformis culture SAG:211-9b mitochondrion, complete genome blastn 6391 84.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Watanabea Watanabea reniformis
27528960 27528960 PRJNA853203_P_NODE_22723_length_260_cov_1.668449_g22574_i0 PRJNA853203 22723 260 1.668449 4.3379674 Chlorella vulgaris 3077 Plants Plants 79.3 4.38e-16   NR KAI3438354.1 3077 g22574 i0 77.6 3.95769230769231 49 11 56.5 0 3 149 139 187 KAI3438354.1 hypothetical protein D9Q98_000786 [Chlorella vulgaris] diamond 1029 79.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;