RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9769659 9769659 PRJNA853203_P_NODE_948_length_633_cov_3.501786_g802_i0 PRJNA853203 948 633 3.501786 22.16630538 Ebria tripartita 361426 SAR_Eukaryotes SAR_Eukaryotes 206 4.5599999999999997e-48   NTclustered gi|290760481|gb|GQ144684.1| 361426 g802 i0 83.051 37.4296998420221 236 31 37 8 1 232 2924 2694 Ebria tripartita large subunit ribosomal RNA gene, partial sequence blastn 23693 206 1 Eukaryota Sar   Cercozoa Thecofilosea   Ebriacea Ebria Ebria tripartita
19086287 19086287 PRJNA853203_P_NODE_8895_length_292_cov_1.100457_g8746_i0 PRJNA853203 8895 292 1.100457 3.21333444 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 281 3.17e-71   NTclustered gi|83034975|gb|DQ211604.1| 352465 g8746 i0 98.137 48.3938356164384 161 3 55 0 1 161 383 543 Bodomorpha sp. HFCC57 28S ribosomal RNA gene, partial sequence blastn 14131 281 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC57

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;