RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA853203" and tax_phylum = "Candidatus Omnitrophota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853203 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13595068 13595068 PRJNA853203_P_NODE_1531_length_491_cov_1.119617_g1384_i0 PRJNA853203 1531 491 1.119617 5.49731947 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 457 8.689999999999999e-124   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g1384 i0 84.483 31.7169042769857 464 70 95 2 1 464 2372200 2371739 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 15573 457 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29928830 29928830 PRJNA853203_P_NODE_15391_length_276_cov_1.536946_g15242_i0 PRJNA853203 15391 276 1.536946 4.24197096 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 108 3.95e-25   NR UCD54744.1 2035772 g15242 i0 58.2 1.96739130434783 91 38 98.9 0 3 275 506 596 UCD54744.1 MAG: glycoside hydrolase family 65 protein [Candidatus Omnitrophota bacterium] diamond 543 108 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30939876 30939876 PRJNA853203_P_NODE_38194_length_247_cov_0.896552_g38045_i0 PRJNA853203 38194 247 0.896552 2.21448344 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 139 1.36e-40   NR MFA5336121.1 2035772 g38045 i0 81.5 5.90283400809717 81 15 98.4 0 3 245 7 87 MFA5336121.1 ammonia channel protein [Candidatus Omnitrophota bacterium] diamond 1458 139 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;