RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA853203" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13988533 13988533 PRJNA853203_P_NODE_34951_length_248_cov_2.302857_g34802_i0 PRJNA853203 34951 248 2.302857 5.71108536 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 145 1.91e-40   NR NBP56400.1 2802965 g34802 i0 82.9 1.98387096774194 82 14 99.2 0 3 248 221 302 NBP56400.1 ribonucleoside-diphosphate reductase [Candidatus Elulimicrobium humile] diamond 492 145 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29454615 29454615 PRJNA853203_P_NODE_18030_length_270_cov_1.593909_g17881_i0 PRJNA853203 18030 270 1.593909 4.3035543 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 92.8 1.24e-19   NR NBP58051.1 2802965 g17881 i0 46.1 0.988888888888889 89 47 98.9 1 3 269 72 159 NBP58051.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 267 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
30276531 30276531 PRJNA853203_P_NODE_37772_length_247_cov_0.896552_g37623_i0 PRJNA853203 37772 247 0.896552 2.21448344 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 49.7 1.38e-4   NR NBP56925.1 2802965 g37623 i0 37.5 0.874493927125506 72 40 81.4 2 39 239 686 757 NBP56925.1 DUF2793 domain-containing protein [Candidatus Elulimicrobium humile] diamond 216 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;