RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA853203" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3392013 3392013 PRJNA853203_P_NODE_14063_length_279_cov_1.514563_g13914_i0 PRJNA853203 14063 279 1.514563 4.22563077 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 195 4.97e-56   NR MFN8603142.1 2838779 g13914 i0 91.4 1 93 8 100 0 1 279 566 658 MFN8603142.1 DUF3604 domain-containing protein [Candidatus Binatia bacterium] diamond 279 195 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27252795 27252795 PRJNA853203_P_NODE_8423_length_293_cov_2.259091_g8274_i0 PRJNA853203 8423 293 2.259091 6.61913663 Bacteria 2 Bacteria Bacteria 140 2.37e-36   NR MEA2626462.1 2528255 g8274 i0 72.2 6.93174061433447 97 27 99.3 0 2 292 155 251 MEA2626462.1 hypothetical protein [Candidatus Binatota bacterium] diamond 2031 140 1 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium
31318922 31318922 PRJNA853203_P_NODE_4555_length_343_cov_1.722222_g4406_i0 PRJNA853203 4555 343 1.722222 5.90722146 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 85.1 1.47e-16   NR HKA53669.1 2838779 g4406 i0 37.8 0.970845481049563 111 54 97.1 1 3 335 128 223 HKA53669.1 hypothetical protein [Candidatus Binatia bacterium] diamond 333 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32014876 32014876 PRJNA853203_P_NODE_38718_length_246_cov_2.520231_g38569_i0 PRJNA853203 38718 246 2.520231 6.19976826 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 147 4.650000000000001e-44   NR MFN8599044.1 2838779 g38569 i0 90 2.92682926829268 80 8 97.6 0 1 240 8 87 MFN8599044.1 hypothetical protein [Candidatus Binatia bacterium] diamond 720 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32678497 32678497 PRJNA853203_P_NODE_16560_length_273_cov_2.735000_g16411_i0 PRJNA853203 16560 273 2.735 7.46655 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 1.03e-32   NR MFN8601022.1 2838779 g16411 i0 83.6 1.6043956043956 73 12 80.2 0 268 50 728 800 MFN8601022.1 redoxin family protein [Candidatus Binatia bacterium] diamond 438 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32836129 32836129 PRJNA853203_P_NODE_36540_length_248_cov_0.891429_g36391_i0 PRJNA853203 36540 248 0.891429 2.21074392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 144 2.78e-38   NR MEO6025849.1 2838779 g36391 i0 86.6 1.95967741935484 82 11 99.2 0 3 248 341 422 MEO6025849.1 ABC transporter permease [Candidatus Binatia bacterium] diamond 486 144 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;