RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11045185 11045185 PRJNA853203_P_NODE_40969_length_245_cov_1.412791_g40820_i0 PRJNA853203 40969 245 1.412791 3.46133795 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 155 2.87e-44   NR WP_299298978.1 1678694 g40820 i0 93.8 0.979591836734694 80 5 98 0 5 244 19 98 WP_299298978.1 glycosyltransferase [uncultured Fretibacterium sp.] diamond 240 155 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
27402784 27402784 PRJNA853203_P_NODE_14683_length_278_cov_1.234146_g14534_i0 PRJNA853203 14683 278 1.234146 3.43092588 Cloacibacillus porcorum 1197717 Bacteria Bacteria 58.9 7.92e-8   NR WP_066745707.1 1197717 g14534 i0 68.6 1.51079136690647 35 11 37.8 0 172 276 1 35 WP_066745707.1 DNA-methyltransferase [Cloacibacillus porcorum] diamond 420 58.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus porcorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;