RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19967909 19967909 PRJNA853203_P_NODE_1836_length_456_cov_1.626632_g1689_i0 PRJNA853203 1836 456 1.626632 7.41744192 Anthopleura elegantissima 6110 Cnidaria other_Eukaryota 172 3.25e-38   NTclustered gi|636577270|gb|KJ483104.1| 6110 g1689 i0 83.871 45.7105263157895 186 24 40 5 1 183 3154 3336 Anthopleura elegantissima isolate aele 28S large subunit ribosomal RNA gene and external transcribed spacer, partial sequence blastn 20844 172 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anthopleura Anthopleura elegantissima
29076277 29076277 PRJNA853203_P_NODE_33428_length_249_cov_1.545455_g33279_i0 PRJNA853203 33428 249 1.545455 3.84818295 Acropora digitifera 70779 Cnidaria other_Eukaryota 51.2 4.14e-5   NR XP_015762410.1 70779 g33279 i0 70.6 42.7951807228916 34 10 41 0 102 1 357 390 XP_015762410.1 PREDICTED: serine/threonine-protein kinase PAK 7-like [Acropora digitifera] diamond 10656 51.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;