RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8494332 8494332 PRJNA853203_P_NODE_30207_length_251_cov_0.876404_g30058_i0 PRJNA853203 30207 251 0.876404 2.19977404 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 252 2.09e-62   NTclustered gi|820695469|tpe|LN714488.1| 572307 g30058 i0 87.907 28.5856573705179 215 25 100 1 25 238 302045 302259 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7175 252 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24186155 24186155 PRJNA853203_P_NODE_1559_length_486_cov_4.280872_g1412_i0 PRJNA853203 1559 486 4.280872 20.80503792 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 139 3.5399999999999993e-28   NTclustered gi|1976646300|ref|XR_005506384.1| 5851 g1412 i0 88.793 24.4794238683128 116 9 23 4 150 263 2235 2348 Plasmodium knowlesi strain H 28S ribosomal RNA (PKNH_1001000), rRNA blastn 11897 139 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;