contig_metadata
12 rows where bioproject = "PRJNA853203", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 841355 | 841355 | PRJNA853203_P_NODE_18781_length_269_cov_1.102041_g18632_i0 | PRJNA853203 | 18781 | 269 | 1.102041 | 2.96449029 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 176 | 1.4e-39 | NTclustered | gi|56753506|gb|AY813225.1| | 6182 | g18632 | i0 | 98.02 | 37.546468401487 | 101 | 2 | 38 | 0 | 121 | 221 | 425 | 525 | Schistosoma japonicum SJCHGC06004 protein mRNA, complete cds | blastn | 10100 | 176 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 14869492 | 14869492 | PRJNA853203_P_NODE_43872_length_244_cov_0.912281_g43723_i0 | PRJNA853203 | 43872 | 244 | 0.912281 | 2.22596564 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 69.4 | 2.19e-7 | NTclustered | gi|56757963|gb|AY815390.1| | 6182 | g43723 | i0 | 100 | 2.42622950819672 | 37 | 0 | 15 | 0 | 1 | 37 | 451 | 415 | Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds | blastn | 592 | 69.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 16144143 | 16144143 | PRJNA853203_P_NODE_23373_length_259_cov_1.419355_g23224_i0 | PRJNA853203 | 23373 | 259 | 1.419355 | 3.67612945 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 353 | 5.77e-93 | NTclustered | gi|60699700|gb|AY915813.1| | 6182 | g23224 | i0 | 99.485 | 52.2702702702703 | 194 | 1 | 75 | 0 | 66 | 259 | 17 | 210 | Schistosoma japonicum clone SJCHGC09741 unknown mRNA | blastn | 13538 | 353 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 18692641 | 18692641 | PRJNA853203_P_NODE_14595_length_278_cov_1.400000_g14446_i0 | PRJNA853203 | 14595 | 278 | 1.4 | 3.892 | Taenia asiatica | 60517 | Platyhelminthes | Platyhelminthes | 87.9 | 7.01e-13 | NTclustered | gi|124784834|gb|EF201974.1| | 60517 | g14446 | i0 | 84.884 | 19.6834532374101 | 86 | 13 | 31 | 0 | 3 | 88 | 198 | 283 | Taenia asiatica clone HC2-A10 cytoplasmic antigen 1 mRNA, complete cds | blastn | 5472 | 87.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Cestoda | Cyclophyllidea | Taeniidae | Taenia | Taenia asiatica | |
| 19968097 | 19968097 | PRJNA853203_P_NODE_4436_length_345_cov_29.900735_g4287_i0 | PRJNA853203 | 4436 | 345 | 29.900735 | 103.15753575 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 573 | 5.629999999999999e-159 | NTclustered | gi|56757963|gb|AY815390.1| | 6182 | g4287 | i0 | 96.562 | 121.640579710145 | 349 | 7 | 100 | 3 | 1 | 345 | 1312 | 1659 | Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds | blastn | 41966 | 573 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 21243463 | 21243463 | PRJNA853203_P_NODE_22117_length_261_cov_22.856383_g21968_i0 | PRJNA853203 | 22117 | 261 | 22.856383 | 59.65515963 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 444 | 3.36e-120 | NTclustered | gi|56757963|gb|AY815390.1| | 6182 | g21968 | i0 | 97.328 | 108.095785440613 | 262 | 5 | 100 | 2 | 1 | 261 | 1469 | 1209 | Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds | blastn | 28213 | 444 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 22518312 | 22518312 | PRJNA853203_P_NODE_49478_length_231_cov_2.424051_g49329_i0 | PRJNA853203 | 49478 | 231 | 2.424051 | 5.59955781 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 318 | 1.84e-82 | NTclustered | gi|60698656|gb|AY915745.1| | 6182 | g49329 | i0 | 98.876 | 12.7835497835498 | 178 | 2 | 77 | 0 | 54 | 231 | 467 | 290 | Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds | blastn | 2953 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 26801770 | 26801770 | PRJNA853203_P_NODE_33301_length_249_cov_1.744318_g33152_i0 | PRJNA853203 | 33301 | 249 | 1.744318 | 4.34335182 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 80.1 | 1.78e-16 | NR | AAX25032.2 | 6182 | g33152 | i0 | 53.7 | 0.807228915662651 | 67 | 31 | 80.7 | 0 | 241 | 41 | 76 | 142 | AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] | diamond | 201 | 80.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 28444775 | 28444775 | PRJNA853203_P_NODE_24026_length_258_cov_0.843243_g23877_i0 | PRJNA853203 | 24026 | 258 | 0.843243 | 2.17556694 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 161 | 9.39e-49 | NR | AAX25839.2 | 6182 | g23877 | i0 | 89.4 | 0.988372093023256 | 85 | 9 | 98.8 | 0 | 4 | 258 | 50 | 134 | AAX25839.2 SJCHGC09516 protein, partial [Schistosoma japonicum] | diamond | 255 | 161 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 29234058 | 29234058 | PRJNA853203_P_NODE_24369_length_257_cov_1.353261_g24220_i0 | PRJNA853203 | 24369 | 257 | 1.353261 | 3.47788077 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 45.1 | 0.00433 | NR | AAX25032.2 | 6182 | g24220 | i0 | 77.8 | 0.712062256809339 | 27 | 6 | 31.5 | 0 | 86 | 166 | 33 | 59 | AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] | diamond | 183 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 29833881 | 29833881 | PRJNA853203_P_NODE_3491_length_366_cov_1.440273_g3343_i0 | PRJNA853203 | 3491 | 366 | 1.440273 | 5.27139918 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 49.7 | 2.76e-5 | NR | ABA40899.1 | 6182 | g3343 | i0 | 59 | 0.319672131147541 | 39 | 14 | 30.3 | 1 | 176 | 66 | 4 | 42 | ABA40899.1 SJCHGC09658 protein, partial [Schistosoma japonicum] | diamond | 117 | 49.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 32804647 | 32804647 | PRJNA853203_P_NODE_1000_length_613_cov_2.061111_g854_i0 | PRJNA853203 | 1000 | 613 | 2.061111 | 12.63461043 | Schistosoma japonicum | 6182 | Platyhelminthes | Platyhelminthes | 97.4 | 2e-21 | NR | AAX25032.2 | 6182 | g854 | i0 | 43.9 | 0.68026101141925 | 139 | 68 | 68 | 2 | 418 | 2 | 1 | 129 | AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] | diamond | 417 | 97.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;