RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5944646 5944646 PRJNA853203_P_NODE_32745_length_250_cov_0.881356_g32596_i0 PRJNA853203 32745 250 0.881356 2.20339 Biomphalaria glabrata 6526 Mollusca Mollusca 52.8 0.023   NTclustered gi|2502174496|ref|XM_013238346.2| 6526 g32596 i0 100 0.112 28 0 11 0 98 125 457 484 PREDICTED: Biomphalaria glabrata replication protein A 70 kDa DNA-binding subunit-like (LOC106077619), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
30655243 30655243 PRJNA853203_P_NODE_42693_length_244_cov_1.801170_g42544_i0 PRJNA853203 42693 244 1.80117 4.3948548 Magallana angulata 2784310 Mollusca Mollusca 111 2.12e-26   NR XP_052681133.1 2784310 g42544 i0 64.6 0.971311475409836 79 28 97.1 0 239 3 918 996 XP_052681133.1 uncharacterized protein LOC128161782 [Magallana angulata] diamond 237 111 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;