RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "Luna-1 subcluster" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9769337 9769337 PRJNA853203_P_NODE_12408_length_283_cov_1.419048_g12259_i0 PRJNA853203 12408 283 1.419048 4.01590584 Aquiluna sp. KACHI24 2968831 Bacteria Bacteria 270 6.619999999999999e-68   NTclustered gi|2283401075|dbj|AP026677.1| 2968831 g12259 i0 84.211 3.45583038869258 285 38 98 3 1 278 86550 86266 Aquiluna sp. KACHI24 DNA, complete genome blastn 978 270 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp. KACHI24
31824863 31824863 PRJNA853203_P_NODE_12277_length_283_cov_1.780952_g12128_i0 PRJNA853203 12277 283 1.780952 5.04009416 Aquiluna sp. 2053504 Bacteria Bacteria 129 2.08e-34   NR MDP4886484.1 2053504 g12128 i0 69 0.92226148409894 87 27 92.2 0 266 6 17 103 MDP4886484.1 ParA family protein [Aquiluna sp.] diamond 261 129 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;