RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2116793 2116793 PRJNA853203_P_NODE_27362_length_253_cov_0.866667_g27213_i0 PRJNA853203 27362 253 0.866667 2.19266751 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 58.4 4.93e-4   NTclustered gi|2893358449|emb|OZ220741.1| 2053570 g27213 i0 100 0.122529644268775 31 0 12 0 3 33 498507 498537 MAG: Candidatus Latescibacterota bacterium isolate a9e09e5c-d410-47d8-823c-ef7e39eb5a37 genome assembly, chromosome: 1 blastn 31 58.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
12320755 12320755 PRJNA853203_P_NODE_43170_length_244_cov_0.912281_g43021_i0 PRJNA853203 43170 244 0.912281 2.22596564 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 134 1.19e-35   NR MBI2503739.1 2053570 g43021 i0 75.3 15.8975409836066 81 20 99.6 0 2 244 13 93 MBI2503739.1 mandelate racemase/muconate lactonizing enzyme family protein [Candidatus Latescibacterota bacterium] diamond 3879 134 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;