RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "Candidatus Thermofonsia Clade 3" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3392264 3392264 PRJNA853203_P_NODE_6423_length_314_cov_0.970954_g6274_i0 PRJNA853203 6423 314 0.970954 3.04879556 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 259 1.6100000000000002e-64   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g6274 i0 82.026 81.4394904458599 306 53 97 2 8 312 4104562 4104258 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 25572 259 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
32173308 32173308 PRJNA853203_P_NODE_6558_length_312_cov_2.707113_g6409_i0 PRJNA853203 6558 312 2.707113 8.44619256 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 132 2.6699999999999996e-35   NR BCX03504.1 2838777 g6409 i0 54.1 1.29807692307692 135 30 99 1 2 310 103 237 BCX03504.1 MAG: hypothetical protein KatS3mg053_1442 [Candidatus Roseilinea sp.] diamond 405 132 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;