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contig_metadata

5 rows where bioproject = "PRJNA853203", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA853203 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26643346 26643346 PRJNA853203_P_NODE_16701_length_273_cov_1.560000_g16552_i0 PRJNA853203 16701 273 1.56 4.2588 Minisyncoccota bacterium 2053589 Bacteria Bacteria 179 9.71e-51   NR MDD3663174.1 2053589 g16552 i0 100 0.956043956043956 87 0 95.6 0 272 12 566 652 MDD3663174.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 261 179 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27434481 27434481 PRJNA853203_P_NODE_17143_length_272_cov_1.567839_g16994_i0 PRJNA853203 17143 272 1.567839 4.26452208 Minisyncoccota bacterium 2053589 Bacteria Bacteria 112 1.34e-27   NR HWO06985.1 2053589 g16994 i0 65.6 1.98529411764706 90 31 99.3 0 271 2 229 318 HWO06985.1 glycosyltransferase family 4 protein [Candidatus Paceibacterota bacterium] diamond 540 112 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28981586 28981586 PRJNA853203_P_NODE_23588_length_258_cov_2.264865_g23439_i0 PRJNA853203 23588 258 2.264865 5.8433517 Patescibacteria group bacterium UBA21 2052139 Bacteria Bacteria 79.3 6.09e-15   NR XKT75115.1 1948790 g23439 i0 87.5 1.11627906976744 48 6 55.8 0 1 144 777 824 XKT75115.1 MAG: DNA gyrase subunit A [Patescibacteria group bacterium UBA2103] diamond 288 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Minusculum Candidatus Minusculum obligatum
29738879 29738879 PRJNA853203_P_NODE_22790_length_260_cov_1.657754_g22641_i0 PRJNA853203 22790 260 1.657754 4.3101604 Minisyncoccota bacterium 2053589 Bacteria Bacteria 133 3.07e-35   NR MCL9972180.1 2053589 g22641 i0 82.5 0.923076923076923 80 14 92.3 0 251 12 1 80 MCL9972180.1 transcription termination factor NusA [Candidatus Paceibacterota bacterium] diamond 240 133 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32749909 32749909 PRJNA853203_P_NODE_22920_length_260_cov_1.331551_g22771_i0 PRJNA853203 22920 260 1.331551 3.4620326 Pseudomonadati 3379134 Bacteria Bacteria 136 7.29e-37   NR MFA6271403.1 2053589 g22771 i0 73.3 3.94615384615385 86 23 99.2 0 3 260 197 282 MFA6271403.1 MT-A70 family methyltransferase [Candidatus Paceibacterota bacterium] diamond 1026 136 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;