RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853203", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA853203 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22518355 22518355 PRJNA853203_P_NODE_9158_length_291_cov_1.399083_g9009_i0 PRJNA853203 9158 291 1.399083 4.07133153 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 171 7.13e-38   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g9009 i0 84.409 14.8453608247423 186 16 62 10 48 226 592462 592283 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 4320 171 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31287216 31287216 PRJNA853203_P_NODE_23395_length_259_cov_1.370968_g23246_i0 PRJNA853203 23395 259 1.370968 3.55080712 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 109 6.1800000000000006e-27   NR MCB9805669.1 2052152 g23246 i0 56.6 0.961389961389961 83 36 96.1 0 8 256 207 289 MCB9805669.1 rhodanese-related sulfurtransferase [Candidatus Nomurabacteria bacterium] diamond 249 109 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;