RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853194" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA853194 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26991515 26991515 PRJNA853194_S_NODE_71462_length_260_cov_1.106952_g70371_i0 PRJNA853194 71462 260 1.106952 2.8780752 Anaerolineales bacterium 2073117 Bacteria Bacteria 42.4 0.0367   NR MCJ7566020.1 2073117 g70371 i0 46.5 0.496153846153846 43 23 49.6 0 159 31 106 148 MCJ7566020.1 FHA domain-containing protein [Anaerolineales bacterium] diamond 129 42.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29454590 29454590 PRJNA853194_S_NODE_25070_length_409_cov_17.598214_g23979_i0 PRJNA853194 25070 409 17.598214 71.97669526 Chloroflexota bacterium 2026724 Bacteria Bacteria 49.3 8.67e-4   NR HHE72379.1 2026724 g23979 i0 37.7 1.04889975550122 69 38 50.6 1 301 95 204 267 HHE72379.1 RNA methyltransferase [Chloroflexota bacterium] diamond 429 49.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;