RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA853194", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA853194 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27537224 27537224 PRJNA853194_S_NODE_57363_length_288_cov_164.837209_g56272_i0 PRJNA853194 57363 288 164.837209 474.73116192 Fungi 4751 Fungi Fungi 64.3 2.27e-10   NR KAI9223987.1 64508 g56272 i0 83.3 3.85416666666667 36 6 37.5 0 287 180 127 162 KAI9223987.1 putative E3 ubiquitin ligase complex SCF subunit sconC [Blastocladiella britannica] diamond 1110 64.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30979660 30979660 PRJNA853194_S_NODE_20114_length_446_cov_16.466488_g19023_i0 PRJNA853194 20114 446 16.466488 73.44053648 Fungi 4751 Fungi Fungi 97.4 2.5e-21   NR KAJ1508357.1 945690 g19023 i0 42.2 4.94394618834081 116 66 77.4 1 387 43 159 274 KAJ1508357.1 Methyltransferase-like protein 6 [Coelomomyces lativittatus] diamond 2205 97.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
32236703 32236703 PRJNA853194_S_NODE_1878_length_1196_cov_15.935886_g1420_i0 PRJNA853194 1878 1196 15.935886 190.59319656 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 112 1.17e-22   NR KNE63598.1 578462 g1420 i0 46.5 0.57190635451505 114 61 28.6 0 34 375 172 285 KNE63598.1 cation diffusion facilitator family transporter [Allomyces macrogynus ATCC 38327] diamond 684 112 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;