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contig_metadata

24 rows where bioproject = "PRJNA853194", tax_kingdom = "Bacillati" and tax_phylum = "Actinomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 24 ✖

tax_kingdom 1

  • Bacillati · 24 ✖

bioproject 1

  • PRJNA853194 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
840711 840711 PRJNA853194_S_NODE_57621_length_288_cov_1.386047_g56530_i0 PRJNA853194 57621 288 1.386047 3.99181536 Micromonospora sp. B006 2201999 Bacteria Bacteria 52.8 0.027   NTclustered gi|1450453732|gb|CP030865.1| 2201999 g56530 i0 100 0.0972222222222222 28 0 10 0 18 45 2839752 2839725 Micromonospora sp. B006 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Micromonospora Micromonospora sp. B006
1234517 1234517 PRJNA853194_S_NODE_64961_length_272_cov_1.889447_g63870_i0 PRJNA853194 64961 272 1.889447 5.13929584 Cutibacterium 1912216 Bacteria Bacteria 475 1.2499999999999999e-129   NTclustered gi|1446500593|gb|CP031442.1| 1747 g63870 i0 98.162 260.834558823529 272 5 100 0 1 272 55522 55793 Cutibacterium acnes strain KCOM 1315 chromosome, complete genome blastn 70947 475 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
2116127 2116127 PRJNA853194_S_NODE_58922_length_285_cov_1.556604_g57831_i0 PRJNA853194 58922 285 1.556604 4.4363214 Micrococcus terreus 574650 Bacteria Bacteria 455 1.72e-123   NTclustered gi|2606505334|gb|CP136963.1| 574650 g57831 i0 95.439 348.410526315789 285 13 100 0 1 285 1206030 1206314 Micrococcus terreus strain UMB0712 chromosome, complete genome blastn 99297 455 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Micrococcus terreus
2510028 2510028 PRJNA853194_S_NODE_29302_length_385_cov_1.750000_g28211_i0 PRJNA853194 29302 385 1.75 6.7375 Cutibacterium 1912216 Bacteria Bacteria 673 0   NTclustered gi|1446500593|gb|CP031442.1| 1747 g28211 i0 98.182 271.187012987013 385 7 100 0 1 385 56108 56492 Cutibacterium acnes strain KCOM 1315 chromosome, complete genome blastn 104407 678 0.992625368731563 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
3786465 3786465 PRJNA853194_S_NODE_65843_length_270_cov_3.126904_g64752_i0 PRJNA853194 65843 270 3.126904 8.4426408 Microbacterium 33882 Bacteria Bacteria 412 9.85e-111   NTclustered gi|2421836332|dbj|AP027141.1| 344163 g64752 i0 94.403 152.840740740741 268 15 99 0 1 268 1041403 1041670 Microbacterium terricola KV-448 DNA, complete genome blastn 41267 412 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium terricola
4669316 4669316 PRJNA853194_S_NODE_66924_length_268_cov_2.210256_g65833_i0 PRJNA853194 66924 268 2.210256 5.92348608 Microbacterium limosum 3079935 Bacteria Bacteria 490 4.39e-134   NTclustered gi|2609663758|gb|CP137080.1| 3079935 g65833 i0 99.627 173.981343283582 268 1 100 0 1 268 816988 817255 Microbacterium limosum strain Y20 chromosome, complete genome blastn 46627 490 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium limosum
8493886 8493886 PRJNA853194_S_NODE_71587_length_259_cov_3.564516_g70496_i0 PRJNA853194 71587 259 3.564516 9.23209644 Streptomyces sp. NBC_01744 2975927 Bacteria Bacteria 52.8 0.024   NTclustered gi|2652825344|gb|CP109148.1| 2975927 g70496 i0 100 0.108108108108108 28 0 11 0 101 128 6608833 6608860 Streptomyces sp. NBC_01744 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NBC_01744
9768637 9768637 PRJNA853194_S_NODE_52148_length_301_cov_2.921053_g51057_i0 PRJNA853194 52148 301 2.921053 8.79236953 Curtobacterium flaccumfaciens 2035 Bacteria Bacteria 67.6 1e-6   NTclustered gi|2699815311|gb|CP147772.1| 138532 g51057 i0 97.436 0.578073089700997 39 1 13 0 40 78 1468796 1468758 Curtobacterium flaccumfaciens pv. flaccumfaciens strain ARGTr 5-2 chromosome, complete genome blastn 174 67.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Curtobacterium Curtobacterium flaccumfaciens
13988270 13988270 PRJNA853194_S_NODE_11_length_4751_cov_29.085720_g7_i0 PRJNA853194 11 4751 29.08572 1381.8625572 root 1 Root_unresolved Root_unresolved 8691 0   NTclustered gi|1851830967|gb|CP050522.1| 1902 g7 i0 99.958 97.1283940223111 4712 2 99 0 1 4712 4166864 4162153 Streptomyces coelicolor strain M1154/pAMX4/pGP1416 chromosome, complete genome blastn 461457 8691 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces coelicolor
13988320 13988320 PRJNA853194_S_NODE_40371_length_337_cov_2.681818_g39280_i0 PRJNA853194 40371 337 2.681818 9.03772666 Microbacterium 33882 Bacteria Bacteria 612 1.16e-170   NTclustered gi|1532072101|gb|CP034245.1| 2483401 g39280 i0 99.407 164.06824925816 337 2 100 0 1 337 2274416 2274752 Microbacterium sp. 10M-3C3 chromosome, complete genome blastn 55291 612 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp. 10M-3C3
17812066 17812066 PRJNA853194_S_NODE_80894_length_246_cov_1.242775_g79803_i0 PRJNA853194 80894 246 1.242775 3.0572265 root 1 Root_unresolved Root_unresolved 348 2.53e-91   NTclustered gi|1851830967|gb|CP050522.1| 1902 g79803 i0 92.245 99.5934959349593 245 19 99 0 1 245 4168319 4168563 Streptomyces coelicolor strain M1154/pAMX4/pGP1416 chromosome, complete genome blastn 24500 348 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces coelicolor
19086032 19086032 PRJNA853194_S_NODE_44075_length_325_cov_1.615079_g42984_i0 PRJNA853194 44075 325 1.615079 5.24900675 root 1 Root_unresolved Root_unresolved 597 3.1299999999999987e-166   NTclustered gi|1851830967|gb|CP050522.1| 1902 g42984 i0 100 99.5938461538462 323 0 99 0 1 323 4161764 4161442 Streptomyces coelicolor strain M1154/pAMX4/pGP1416 chromosome, complete genome blastn 32368 597 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces coelicolor
25461113 25461113 PRJNA853194_S_NODE_22000_length_431_cov_1.687151_g20909_i0 PRJNA853194 22000 431 1.687151 7.27162081 Microbacterium 33882 Bacteria Bacteria 780 0   NTclustered gi|1137412343|gb|CP018762.1| 36805 g20909 i0 99.304 162.554524361949 431 3 100 0 1 431 2342208 2341778 Microbacterium aurum strain KACC 15219 chromosome, complete genome blastn 70061 785 0.993630573248408 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium aurum
25461229 25461229 PRJNA853194_S_NODE_79200_length_248_cov_1.074286_g78109_i0 PRJNA853194 79200 248 1.074286 2.66422928 Dietzia 37914 Bacteria Bacteria 278 3.4e-70   NTclustered gi|1783245866|gb|CP046567.1| 912801 g78109 i0 87.398 2.49193548387097 246 25 99 2 3 248 606954 607193 Dietzia sp. DQ12-45-1b chromosome, complete genome blastn 618 278 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Dietziaceae Dietzia Dietzia sp. DQ12-45-1b
29518049 29518049 PRJNA853194_S_NODE_68790_length_265_cov_1.151042_g67699_i0 PRJNA853194 68790 265 1.151042 3.0502613 Sinomonas cellulolyticus 2801916 Bacteria Bacteria 43.5 0.0254   NR WP_189693105.1 2801916 g67699 i0 35.5 0.860377358490566 76 42 86 1 32 259 97 165 WP_189693105.1 glycosyltransferase 87 family protein [Sinomonas cellulolyticus] diamond 228 43.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Sinomonas Sinomonas cellulolyticus
29833867 29833867 PRJNA853194_S_NODE_65011_length_272_cov_1.663317_g63920_i0 PRJNA853194 65011 272 1.663317 4.52422224 Streptomyces sp. NPDC 1931 Bacteria Bacteria 44.3 0.0157   NR WP_399435965.1 3365658 g63920 i0 47.5 0.441176470588235 40 21 44.1 0 71 190 1206 1245 WP_399435965.1 hypothetical protein [Streptomyces sp. NPDC051561] diamond 120 44.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC051561
29905424 29905424 PRJNA853194_S_NODE_80631_length_246_cov_1.745665_g79540_i0 PRJNA853194 80631 246 1.745665 4.2943359 root 1 Root_unresolved Root_unresolved 105 8.870000000000001e-27   NR NSL78899.1 1902 g79540 i0 74.7 5.78048780487805 79 20 96.3 0 237 1 45 123 NSL78899.1 hypothetical protein [Streptomyces coelicolor] diamond 1422 105 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces coelicolor
30592048 30592048 PRJNA853194_S_NODE_62313_length_278_cov_1.029268_g61222_i0 PRJNA853194 62313 278 1.029268 2.86136504 Streptomyces sp. NPDC 1931 Bacteria Bacteria 43.9 0.0213   NR WP_388990728.1 3364609 g61222 i0 43.2 0.474820143884892 44 25 47.5 0 174 43 118 161 WP_388990728.1 serine hydroxymethyltransferase [Streptomyces sp. NPDC001796] diamond 132 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC001796
30853087 30853087 PRJNA853194_S_NODE_85094_length_241_cov_1.773810_g84003_i0 PRJNA853194 85094 241 1.77381 4.2748821 Streptomyces 1883 Bacteria Bacteria 42.7 0.0288   NR WP_053657044.1 1415544 g84003 i0 33.3 1.26970954356846 48 32 59.8 0 175 32 51 98 WP_053657044.1 phosphatase PAP2 family protein [Streptomyces sp. MMG1121] diamond 306 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. MMG1121
31698509 31698509 PRJNA853194_S_NODE_77617_length_250_cov_0.870056_g76526_i0 PRJNA853194 77617 250 0.870056 2.17514 Microbispora sp. H1 1898321 Bacteria Bacteria 42.4 0.0396   NR WP_182879688.1 2729111 g76526 i0 35.7 0.84 70 37 74.4 3 9 194 123 192 WP_182879688.1 hypothetical protein [Microbispora sp. H10949] diamond 210 42.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Streptosporangiales Streptosporangiaceae Microbispora Microbispora sp. H10949
32109791 32109791 PRJNA853194_S_NODE_75738_length_252_cov_1.592179_g74647_i0 PRJNA853194 75738 252 1.592179 4.01229108 Acidimicrobiales bacterium 2201156 Bacteria Bacteria 42 0.0204   NR MFI5040452.1 2201156 g74647 i0 36.4 0.654761904761905 55 35 65.5 0 27 191 19 73 MFI5040452.1 hypothetical protein [Acidimicrobiales bacterium] diamond 165 42 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales     Acidimicrobiales bacterium
32308155 32308155 PRJNA853194_S_NODE_64439_length_273_cov_1.940000_g63348_i0 PRJNA853194 64439 273 1.94 5.2962 Acidimicrobiales 84993 Bacteria Bacteria 44.7 0.0104   NR HBZ62281.1 1872112 g63348 i0 37.3 7.13186813186813 59 36 64.8 1 239 63 63 120 HBZ62281.1 pyruvate dehydrogenase [Acidimicrobium sp.] diamond 1947 45.1 0.991130820399113 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Acidimicrobiaceae Acidimicrobium Acidimicrobium sp.
32426253 32426253 PRJNA853194_S_NODE_80379_length_247_cov_0.879310_g79288_i0 PRJNA853194 80379 247 0.87931 2.1718957 Streptosporangium sp. NPDC 47486 Bacteria Bacteria 43.1 0.0282   NR WP_362803166.1 3154794 g79288 i0 39.3 0.740890688259109 61 34 72.9 2 231 52 123 181 WP_362803166.1 AAA family ATPase [Streptosporangium sp. NPDC023615] diamond 183 43.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Streptosporangiales Streptosporangiaceae Streptosporangium Streptosporangium sp. NPDC023615
32489661 32489661 PRJNA853194_S_NODE_62919_length_276_cov_2.906404_g61828_i0 PRJNA853194 62919 276 2.906404 8.02167504 Mycobacterium leprae 1769 Bacteria Bacteria 40.8 0.029   NR WP_162618264.1 1769 g61828 i0 35 0.434782608695652 40 26 43.5 0 56 175 11 50 WP_162618264.1 hypothetical protein [Mycobacterium leprae] diamond 120 40.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium leprae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;