RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where bioproject = "PRJNA853194", tax_clade = "Sar" and tax_phylum = "Ciliophora"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 24 ✖

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJNA853194 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2115396 2115396 PRJNA853194_S_NODE_2222_length_1123_cov_84.848571_g1708_i0 PRJNA853194 2222 1123 84.848571 952.84945233 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.032   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g1708 i0 100 0.0258236865538736 29 0 3 0 1095 1123 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
2115419 2115419 PRJNA853194_S_NODE_23222_length_422_cov_2.292264_g22131_i0 PRJNA853194 23222 422 2.292264 9.67335408 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g22131 i0 96.97 0.353080568720379 33 1 8 0 390 422 42 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 149 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
5943200 5943200 PRJNA853194_S_NODE_2385_length_1091_cov_93.768173_g1708_i1 PRJNA853194 2385 1091 93.768173 1023.01076743 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.031   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g1708 i1 100 0.0265811182401467 29 0 3 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
5943216 5943216 PRJNA853194_S_NODE_24365_length_414_cov_6.032258_g23274_i0 PRJNA853194 24365 414 6.032258 24.97354812 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.011   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g23274 i0 100 0.13768115942029 29 0 7 0 386 414 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
8494035 8494035 PRJNA853194_S_NODE_79827_length_247_cov_1.419540_g78736_i0 PRJNA853194 79827 247 1.41954 3.5062638 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g78736 i0 100 0.57085020242915 29 0 12 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
11044920 11044920 PRJNA853194_S_NODE_9249_length_616_cov_114.622468_g8225_i0 PRJNA853194 9249 616 114.622468 706.07440288 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.017   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g8225 i0 100 0.0470779220779221 29 0 5 0 588 616 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
12319353 12319353 PRJNA853194_S_NODE_28790_length_387_cov_8.627389_g27699_i0 PRJNA853194 28790 387 8.627389 33.38799543 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g27699 i0 100 0.364341085271318 29 0 7 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
12320484 12320484 PRJNA853194_S_NODE_8710_length_632_cov_18.957066_g7699_i0 PRJNA853194 8710 632 18.957066 119.80865712 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.017   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g7699 i0 100 0.0458860759493671 29 0 5 0 604 632 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
13594070 13594070 PRJNA853194_S_NODE_38631_length_344_cov_1.092251_g37540_i0 PRJNA853194 38631 344 1.092251 3.75734344 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g37540 i0 94.444 0.348837209302326 36 0 10 2 310 344 46 12 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 120 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
14868228 14868228 PRJNA853194_S_NODE_3572_length_921_cov_162.852594_g2864_i0 PRJNA853194 3572 921 162.852594 1499.87239074 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.026   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g2864 i0 100 0.0694896851248643 29 0 3 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 64 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
16143481 16143481 PRJNA853194_S_NODE_5713_length_761_cov_158.324128_g4832_i0 PRJNA853194 5713 761 158.324128 1204.84661408 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.021   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g4832 i0 100 0.038107752956636 29 0 4 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
18691023 18691023 PRJNA853194_S_NODE_10815_length_576_cov_5.614314_g9766_i0 PRJNA853194 10815 576 5.614314 32.33844864 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.016   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g9766 i0 100 0.0503472222222222 29 0 5 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
19966253 19966253 PRJNA853194_S_NODE_12916_length_535_cov_3.417749_g11841_i0 PRJNA853194 12916 535 3.417749 18.28495715 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.015   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g11841 i0 100 0.0542056074766355 29 0 5 0 507 535 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
22516786 22516786 PRJNA853194_S_NODE_2618_length_1051_cov_6.383436_g2028_i0 PRJNA853194 2618 1051 6.383436 67.08991236 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.03   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g2028 i0 100 0.027592768791627 29 0 3 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
22517089 22517089 PRJNA853194_S_NODE_40578_length_336_cov_32.604563_g39487_i0 PRJNA853194 40578 336 32.604563 109.55133168 Aspidisca cf. leptaspis 2994701 SAR_Eukaryotes SAR_Eukaryotes 141 6.58e-29   NTclustered gi|2328859117|gb|OP828522.1| 2994701 g39487 i0 88.696 27.1220238095238 115 13 34 0 222 336 662 776 Aspidisca cf. leptaspis isolate LCY2018040104 large subunit ribosomal RNA gene, partial sequence blastn 9113 141 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Aspidiscidae Aspidisca Aspidisca cf. leptaspis
22517485 22517485 PRJNA853194_S_NODE_61518_length_279_cov_2.504854_g60427_i0 PRJNA853194 61518 279 2.504854 6.98854266 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g60427 i0 100 0.100358422939068 28 0 10 0 1 28 10 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
23793467 23793467 PRJNA853194_S_NODE_86499_length_235_cov_80.481481_g85408_i0 PRJNA853194 86499 235 80.481481 189.13148035 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g85408 i0 100 0.6 29 0 12 0 207 235 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
23793504 23793504 PRJNA853194_S_NODE_9619_length_605_cov_68.394737_g8587_i0 PRJNA853194 9619 605 68.394737 413.78815885 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.017   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g8587 i0 100 0.0479338842975207 29 0 5 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
28168692 28168692 PRJNA853194_S_NODE_31705_length_373_cov_1.216667_g30614_i0 PRJNA853194 31705 373 1.216667 4.53816791 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 133 3.86e-35   NR XP_001452796.1 5888 g30614 i0 53.7 21.6193029490617 123 57 98.9 0 370 2 98 220 XP_001452796.1 uncharacterized protein GSPATT00002799001 [Paramecium tetraurelia] diamond 8064 134 0.992537313432836 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
28389605 28389605 PRJNA853194_S_NODE_1366_length_1330_cov_13.017502_g919_i1 PRJNA853194 1366 1330 13.017502 173.1327766 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 5.1e-19   NR CDW79198.1 5949 g919 i1 25.4 1.10751879699248 256 179 57.5 4 1263 499 489 733 CDW79198.1 cullin c [Stylonychia lemnae] diamond 1473 102 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29644019 29644019 PRJNA853194_S_NODE_14870_length_504_cov_6.561485_g13785_i0 PRJNA853194 14870 504 6.561485 33.0698844 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.0269   NR KAL4450420.1 5901 g13785 i0 24.1 0.69047619047619 116 79 64.9 3 422 96 101 214 KAL4450420.1 hypothetical protein ABPG74_019318 [Tetrahymena malaccensis] diamond 348 46.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
31580341 31580341 PRJNA853194_S_NODE_38956_length_342_cov_4.579926_g37865_i0 PRJNA853194 38956 342 4.579926 15.66334692 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0121   NR OMJ88354.1 5963 g37865 i0 48.8 2.81578947368421 41 15 31.6 2 185 292 384 423 OMJ88354.1 hypothetical protein SteCoe_9770 [Stentor coeruleus] diamond 963 45.4 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
31761750 31761750 PRJNA853194_S_NODE_78957_length_248_cov_1.514286_g77866_i0 PRJNA853194 78957 248 1.514286 3.75542928 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 67.4 8.11e-11   NR CDW81364.1 5949 g77866 i0 47.8 1.81451612903226 69 36 83.5 0 42 248 385 453 CDW81364.1 kif1-binding protein homolog [Stylonychia lemnae] diamond 450 67.4 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32773103 32773103 PRJNA853194_S_NODE_1100_length_1421_cov_86.551929_g802_i0 PRJNA853194 1100 1421 86.551929 1229.90291109 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 258 2.88e-79   NR CAD8068969.1 5886 g802 i0 50.2 1.16959887403237 277 130 58.3 4 116 943 2 271 CAD8068969.1 unnamed protein product [Paramecium primaurelia] diamond 1662 258 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;