RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA853194", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA853194 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26928455 26928455 PRJNA853194_S_NODE_24042_length_416_cov_30.825073_g22951_i0 PRJNA853194 24042 416 30.825073 128.23230368 Ignavibacterium sp. 2651167 Bacteria Bacteria 93.2 1e-20   NR MFN3872034.1 2651167 g22951 i0 47.8 4.84615384615385 90 46 64.2 1 91 357 93 182 MFN3872034.1 cob(I)yrinic acid a,c-diamide adenosyltransferase [Ignavibacterium sp.] diamond 2016 93.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
32394624 32394624 PRJNA853194_S_NODE_41299_length_334_cov_2.371648_g40208_i0 PRJNA853194 41299 334 2.371648 7.92130432 Rosettibacter primus 3111523 Bacteria Bacteria 43.9 0.0387   NR WP_353675908.1 3111523 g40208 i0 36.6 0.637724550898204 71 42 61.1 2 265 62 243 313 WP_353675908.1 GWxTD domain-containing protein [Rosettibacter primus] diamond 213 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Rosettibacter Rosettibacter primus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;