RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA853194", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA853194 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
840031 840031 PRJNA853194_S_NODE_26201_length_402_cov_3.577508_g25110_i0 PRJNA853194 26201 402 3.577508 14.38158216 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.039   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g25110 i0 100 0.0696517412935323 28 0 7 0 373 400 35 8 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
28737011 28737011 PRJNA853194_S_NODE_17827_length_468_cov_14.789873_g16738_i0 PRJNA853194 17827 468 14.789873 69.21660564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 2.3599999999999997e-25   NR KAG8339691.1 5699 g16738 i0 43.8 4.30769230769231 112 63 71.8 0 1 336 202 313 KAG8339691.1 putative GDP-L-fucose synthetase [Trypanosoma vivax] diamond 2016 109 0.990825688073395 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
32236714 32236714 PRJNA853194_S_NODE_6238_length_733_cov_68.833333_g5330_i0 PRJNA853194 6238 733 68.833333 504.54833089 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 190 1.71e-52   NR KAJ9461372.1 91374 g5330 i0 42.4 0.859481582537517 210 121 85.9 0 3 632 420 629 KAJ9461372.1 Proline dehydrogenase 1 [Diplonema papillatum] diamond 630 190 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32836114 32836114 PRJNA853194_S_NODE_7360_length_682_cov_9.034483_g6394_i0 PRJNA853194 7360 682 9.034483 61.61517406 Phytomonas sp. Hart1 223615 Euglenozoa other_Eukaryota 47 0.0418   NR CCW67193.1 223615 g6394 i0 21.7 0.708211143695015 161 119 70.8 3 169 651 220 373 CCW67193.1 unnamed protein product [Phytomonas sp. Hart1] diamond 483 47 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;