RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA853194", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Magasanikiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA853194 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26865465 26865465 PRJNA853194_S_NODE_8541_length_638_cov_4.713274_g7534_i0 PRJNA853194 8541 638 4.713274 30.07068812 Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_4 2026717 Bacteria Bacteria 47 0.0286   NR OGH92228.1 1798705 g7534 i0 33 0.456112852664577 97 54 40.9 3 201 461 61 156 OGH92228.1 MAG: hypothetical protein A2563_00090 [Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23] diamond 291 47 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;