RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA851399", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA851399 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7217238 7217238 PRJNA851399_P_NODE_10066_length_249_cov_1.500000_g9613_i0 PRJNA851399 10066 249 1.5 3.735 Candidatus Nitrosocosmicus franklandianus 1798806 Archaea Archaea 339 1.5399999999999998e-88   NTclustered gi|1599533355|emb|LR216287.1| 1798806 g9613 i0 91.498 62.7269076305221 247 19 99 2 3 249 1683 1439 Candidatus Nitrosocosmicus franklandus isolate NFRAN1 genome assembly, chromosome: NFRAN blastn 15619 339 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus franklandianus
30884693 30884693 PRJNA851399_P_NODE_24194_length_168_cov_1.714286_g23741_i0 PRJNA851399 24194 168 1.714286 2.88000048 Thermoproteati 1783275 Archaea Archaea 109 1.16e-26   NR TLX88064.1 2026795 g23741 i0 96.4 4.89285714285714 55 2 98.2 0 2 166 215 269 TLX88064.1 MAG: TIGR00300 family protein [Nitrososphaerota archaeon] diamond 822 110 0.990909090909091 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;