RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA849822" and tax_phylum = "Candidatus Parcubacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29675566 29675566 PRJNA849822_P_NODE_25850_length_286_cov_1.464789_g25676_i0 PRJNA849822 25850 286 1.464789 4.18929654 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 99.8 4.4699999999999996e-23   NR MEN9852531.1 2762014 g25676 i0 75.8 1.3006993006993 62 15 65 0 284 99 216 277 MEN9852531.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 372 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31824800 31824800 PRJNA849822_P_NODE_42297_length_243_cov_0.917647_g42123_i0 PRJNA849822 42297 243 0.917647 2.22988221 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 56.6 3.27e-7   NR MEN9389820.1 2762014 g42123 i0 34.2 0.901234567901235 73 46 87.7 1 17 229 94 166 MEN9389820.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 219 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;