RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA849822" and tax_phylum = "Candidatus Bipolaricaulota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26801657 26801657 PRJNA849822_P_NODE_25781_length_286_cov_2.187793_g25607_i0 PRJNA849822 25781 286 2.187793 6.25708798 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 50.4 1.22e-4   NR MBE0635561.1 2306012 g25607 i0 45.5 0.923076923076923 88 30 90.2 5 20 277 320 391 MBE0635561.1 tandem-95 repeat protein [Candidatus Bipolaricaulota bacterium] diamond 264 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
32773060 32773060 PRJNA849822_P_NODE_39900_length_246_cov_0.901734_g39726_i0 PRJNA849822 39900 246 0.901734 2.21826564 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 43.9 0.0138   NR MFC2094820.1 2306012 g39726 i0 42.9 1.76829268292683 49 26 59.8 1 246 100 212 258 MFC2094820.1 ZIP family transporter [Candidatus Bipolaricaulota bacterium] diamond 435 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;