RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA849822" and tax_kingdom = "Thermotogati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 13 ✖

bioproject 1

  • PRJNA849822 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4667146 4667146 PRJNA849822_P_NODE_37744_length_248_cov_0.891429_g37570_i0 PRJNA849822 37744 248 0.891429 2.21074392 Thermus sp. NEB1569 2918899 Bacteria Bacteria 359 1.18e-94   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g37570 i0 92.742 1 248 18 100 0 1 248 575286 575533 Thermus sp. NEB1569 chromosome, complete genome blastn 248 359 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
12317790 12317790 PRJNA849822_P_NODE_27930_length_276_cov_1.458128_g27756_i0 PRJNA849822 27930 276 1.458128 4.02443328 uncultured Dethiosulfovibrio sp. 185448 Bacteria Bacteria 54.7 0.007   NTclustered gi|2621705290|emb|OY763420.1| 185448 g27756 i0 100 0.105072463768116 29 0 11 0 205 233 2057251 2057223 MAG: uncultured Dethiosulfovibrio sp. isolate 94f88398-021e-4021-9552-bf231e535e7d genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Dethiosulfovibrio uncultured Dethiosulfovibrio sp.
13592363 13592363 PRJNA849822_P_NODE_33231_length_253_cov_1.672222_g33057_i0 PRJNA849822 33231 253 1.672222 4.23072166 Thermus thermophilus 274 Bacteria Bacteria 446 9.01e-121   NTclustered gi|383508497|gb|CP003252.1| 798128 g33057 i0 98.419 40.2134387351779 253 4 100 0 1 253 1432633 1432381 Thermus thermophilus JL-18, complete genome blastn 10174 446 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
19965126 19965126 PRJNA849822_P_NODE_36556_length_249_cov_1.772727_g36382_i0 PRJNA849822 36556 249 1.772727 4.41409023 Thermus thermophilus 274 Bacteria Bacteria 449 6.840000000000001e-122   NTclustered gi|333965676|gb|CP002777.1| 762633 g36382 i0 99.197 36 249 2 100 0 1 249 571431 571183 Thermus thermophilus SG0.5JP17-16, complete genome blastn 8964 449 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
19965232 19965232 PRJNA849822_P_NODE_7836_length_544_cov_3.751592_g7664_i0 PRJNA849822 7836 544 3.751592 20.408660480000002 Bacteria 2 Bacteria Bacteria 288 2.28e-93   NR WP_013704011.1 186192 g7664 i0 77.3 4.99080882352941 181 40 99.8 1 543 1 112 291 WP_013704011.1 isocitrate lyase [Marinithermus hydrothermalis] diamond 2715 288 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Marinithermus Marinithermus hydrothermalis
27284472 27284472 PRJNA849822_P_NODE_35383_length_251_cov_0.876404_g35209_i0 PRJNA849822 35383 251 0.876404 2.19977404 Meiothermus 65551 Bacteria Bacteria 87 1.05e-17   NR WP_027883417.1 604332 g35209 i0 53 2.97609561752988 83 38 99.2 1 249 1 381 462 WP_027883417.1 polyphosphate kinase [Meiothermus rufus] diamond 747 87 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus rufus
27402709 27402709 PRJNA849822_P_NODE_39603_length_246_cov_0.901734_g39429_i0 PRJNA849822 39603 246 0.901734 2.21826564 Synergistaceae bacterium 2053624 Bacteria Bacteria 53.9 1.68e-6   NR MDR2137471.1 2053624 g39429 i0 47.2 1.45121951219512 53 20 54.9 2 140 6 23 75 MDR2137471.1 TerD family protein [Synergistaceae bacterium] diamond 357 53.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
27465922 27465922 PRJNA849822_P_NODE_42403_length_243_cov_0.917647_g42229_i0 PRJNA849822 42403 243 0.917647 2.22988221 Deinococcus psychrotolerans 2489213 Bacteria Bacteria 144 3.92e-41   NR WP_124873341.1 2489213 g42229 i0 84.6 0.962962962962963 78 12 96.3 0 5 238 34 111 WP_124873341.1 hypothetical protein [Deinococcus psychrotolerans] diamond 234 144 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus psychrotolerans
29233990 29233990 PRJNA849822_P_NODE_34789_length_252_cov_0.871508_g34615_i0 PRJNA849822 34789 252 0.871508 2.19620016 Calidithermus chliarophilus 52023 Bacteria Bacteria 68.6 1.48e-11   NR WP_027891004.1 52023 g34615 i0 42.7 2.94047619047619 82 40 94 3 14 250 4 81 WP_027891004.1 tRNA (adenine-N1)-methyltransferase [Calidithermus chliarophilus] diamond 741 68.6 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Calidithermus Calidithermus chliarophilus
29486253 29486253 PRJNA849822_P_NODE_35370_length_251_cov_0.876404_g35196_i0 PRJNA849822 35370 251 0.876404 2.19977404 Thermus scotoductus 37636 Bacteria Bacteria 91.7 1.72e-19   NR WP_126218861.1 37636 g35196 i0 59.7 0.920318725099602 77 31 92 0 7 237 79 155 WP_126218861.1 hypothetical protein [Thermus scotoductus] diamond 231 91.7 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus scotoductus
29517976 29517976 PRJNA849822_P_NODE_27370_length_279_cov_1.135922_g27196_i0 PRJNA849822 27370 279 1.135922 3.16922238 Oceanithermus desulfurans 227924 Bacteria Bacteria 55.1 1.72e-6   NR WP_147147306.1 227924 g27196 i0 45.7 1.51612903225806 70 31 67.7 1 86 274 38 107 WP_147147306.1 spondin domain-containing protein [Oceanithermus desulfurans] diamond 423 55.1 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Oceanithermus Oceanithermus desulfurans
30497398 30497398 PRJNA849822_P_NODE_43713_length_236_cov_2.067485_g43539_i0 PRJNA849822 43713 236 2.067485 4.8792646 Synergistaceae bacterium 2053624 Bacteria Bacteria 42.7 0.0341   NR MCE5200888.1 2053624 g43539 i0 36 0.635593220338983 50 32 63.6 0 17 166 136 185 MCE5200888.1 1,4-alpha-glucan branching protein GlgB [Synergistaceae bacterium] diamond 150 42.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30655111 30655111 PRJNA849822_P_NODE_18993_length_332_cov_1.482625_g18819_i0 PRJNA849822 18993 332 1.482625 4.922315 Meiothermus cerbereus 65552 Bacteria Bacteria 65.9 8.14e-10   NR WP_027878265.1 65552 g18819 i0 63.6 3.19879518072289 44 16 39.8 0 319 188 142 185 WP_027878265.1 penicillin acylase family protein [Meiothermus cerbereus] diamond 1062 65.9 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus cerbereus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;