RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA849822", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJNA849822 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20359884 20359884 PRJNA849822_P_NODE_23556_length_298_cov_2.013333_g23382_i0 PRJNA849822 23556 298 2.013333 5.99973234 Fimbriimonas 1005038 Bacteria Bacteria 551 2.239999999999999e-152   NTclustered gi|663071213|gb|CP007139.1| 661478 g23382 i0 100 205.238255033557 298 0 100 0 1 298 27042 27339 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 61161 551 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
27623851 27623851 PRJNA849822_P_NODE_5564_length_664_cov_1.370558_g5395_i0 PRJNA849822 5564 664 1.370558 9.10050512 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 65.1 3.9e-8   NR HMS55856.1 2682144 g5395 i0 31.4 1.00753012048193 223 102 97.1 10 2 646 1448 1627 HMS55856.1 Ig-like domain-containing protein [Fimbriimonadaceae bacterium] diamond 669 65.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27718776 27718776 PRJNA849822_P_NODE_23124_length_301_cov_1.394737_g22950_i0 PRJNA849822 23124 301 1.394737 4.19815837 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 59.3 4.17e-8   NR HXH61281.1 2682144 g22950 i0 40.3 1.30564784053156 77 37 75.7 3 300 73 118 186 HXH61281.1 phosphatase PAP2 family protein [Fimbriimonadaceae bacterium] diamond 393 59.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28254975 28254975 PRJNA849822_P_NODE_24086_length_295_cov_1.558559_g23912_i0 PRJNA849822 24086 295 1.558559 4.59774905 Armatimonadota bacterium 2033014 Bacteria Bacteria 59.7 7.7e-8   NR MBC8104786.1 2033014 g23912 i0 41.7 3.76271186440678 72 39 73.2 1 79 294 675 743 MBC8104786.1 hypothetical protein [Armatimonadota bacterium] diamond 1110 59.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29833773 29833773 PRJNA849822_P_NODE_19011_length_332_cov_1.204633_g18837_i0 PRJNA849822 19011 332 1.204633 3.99938156 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 54.3 9.25e-7   NR HLK57827.1 2739509 g18837 i0 36.7 0.713855421686747 79 42 71.4 3 332 96 25 95 HLK57827.1 carbohydrate-binding module family 20 domain-containing protein [Chthonomonadaceae bacterium] diamond 237 54.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31200197 31200197 PRJNA849822_P_NODE_23335_length_300_cov_1.030837_g23161_i0 PRJNA849822 23335 300 1.030837 3.092511 Bacteria 2 Bacteria Bacteria 47 0.00128   NR PIZ29942.1 1973908 g23161 i0 33.3 13.48 96 53 91 4 279 7 80 169 PIZ29942.1 MAG: hypothetical protein COY42_34735, partial [Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14] diamond 4044 47.4 0.991561181434599 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14
31508824 31508824 PRJNA849822_P_NODE_31396_length_261_cov_1.244681_g31222_i0 PRJNA849822 31396 261 1.244681 3.24861741 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 53.5 7.76e-6   NR MEJ5294471.1 2682145 g31222 i0 46.4 0.793103448275862 69 35 78.2 2 46 249 1213 1280 MEJ5294471.1 carboxypeptidase regulatory-like domain-containing protein [Fimbriimonadales bacterium] diamond 207 53.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;