RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849822", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26999747 26999747 PRJNA849822_P_NODE_34122_length_252_cov_1.379888_g33948_i0 PRJNA849822 34122 252 1.379888 3.47731776 Pseudomonadati 3379134 Bacteria Bacteria 119 6.46e-29   NR OQA56336.1 1852853 g33948 i0 67.5 5.92857142857143 83 27 98.8 0 3 251 400 482 OQA56336.1 MAG: Glycogen phosphorylase [Candidatus Omnitrophica bacterium ADurb.Bin277] diamond 1494 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium ADurb.Bin277
32773059 32773059 PRJNA849822_P_NODE_3980_length_802_cov_1.857339_g3819_i0 PRJNA849822 3980 802 1.857339 14.89585878 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 149 5.52e-39   NR MFH1858377.1 2035772 g3819 i0 38.7 0.841645885286783 225 133 83 3 137 802 26 248 MFH1858377.1 mechanosensitive ion channel family protein [Candidatus Omnitrophota bacterium] diamond 675 149 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;