RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849822", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28381358 28381358 PRJNA849822_P_NODE_12606_length_414_cov_1.601173_g12432_i0 PRJNA849822 12606 414 1.601173 6.62885622 Fidelibacterota bacterium 2026760 Bacteria Bacteria 60.8 1.12e-7   NR MBT4252600.1 2026760 g12432 i0 30.3 2.15217391304348 99 68 71.7 1 363 67 336 433 MBT4252600.1 LamG domain-containing protein [Fidelibacterota bacterium] diamond 891 60.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29968439 29968439 PRJNA849822_P_NODE_17851_length_343_cov_1.144444_g17677_i0 PRJNA849822 17851 343 1.144444 3.92544292 Bacteria 2 Bacteria Bacteria 125 1.5499999999999998e-31   NR HJL75051.1 2026760 g17677 i0 56.3 12.7959183673469 103 45 90.1 0 338 30 322 424 HJL75051.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Fidelibacterota bacterium] diamond 4389 126 0.992063492063492 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;