RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA849822", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA849822 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29526406 29526406 PRJNA849822_P_NODE_32810_length_255_cov_1.329670_g32636_i0 PRJNA849822 32810 255 1.32967 3.3906585 Bacteria 2 Bacteria Bacteria 44.3 0.00973   NR WP_018127420.1 287535 g32636 i0 50 1.2 34 17 40 0 255 154 45 78 WP_018127420.1 tetratricopeptide repeat protein [Balneola vulgaris] diamond 306 44.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola vulgaris
30149560 30149560 PRJNA849822_P_NODE_6472_length_608_cov_1.863551_g6303_i0 PRJNA849822 6472 608 1.863551 11.33039008 Balneolales bacterium 2497613 Bacteria Bacteria 136 5.59e-34   NR HKJ30596.1 2497613 g6303 i0 38.9 1.02631578947368 208 100 90.8 8 55 606 12 216 HKJ30596.1 phosphatidylinositol-specific phospholipase C domain-containing protein [Balneolales bacterium] diamond 624 136 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
32710086 32710086 PRJNA849822_P_NODE_13440_length_400_cov_0.984709_g13266_i0 PRJNA849822 13440 400 0.984709 3.938836 Balneolaceae bacterium 2053516 Bacteria Bacteria 86.7 7.52e-19   NR HKL15208.1 2053516 g13266 i0 61.9 2.0475 63 23 47.3 1 212 400 5 66 HKL15208.1 hypothetical protein [Balneolaceae bacterium] diamond 819 86.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;