RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849822", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division FCPU426"

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tax_superkingdom 1

tax_phylum 1

  • candidate division FCPU426 · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1233423 1233423 PRJNA849822_P_NODE_13861_length_392_cov_2.094044_g13687_i0 PRJNA849822 13861 392 2.094044 8.20865248 candidate division FCPU426 bacterium 2052330 Bacteria Bacteria 85.1 1.01e-18   NR MBN1594640.1 2052330 g13687 i0 45.5 1.3469387755102 88 45 67.3 1 101 364 4 88 MBN1594640.1 stage V sporulation protein S [candidate division FCPU426 bacterium] diamond 528 85.1 1 Bacteria Bacteria candidate phyla   candidate division FCPU426         candidate division FCPU426 bacterium
27623835 27623835 PRJNA849822_P_NODE_3684_length_841_cov_3.118490_g3525_i0 PRJNA849822 3684 841 3.11849 26.2265009 candidate division FCPU426 bacterium 2052330 Bacteria Bacteria 84.7 6.44e-17   NR MBN1594640.1 2052330 g3525 i0 45.5 0.62782401902497 88 45 31.4 1 88 351 4 88 MBN1594640.1 stage V sporulation protein S [candidate division FCPU426 bacterium] diamond 528 84.7 1 Bacteria Bacteria candidate phyla   candidate division FCPU426         candidate division FCPU426 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;