RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849822", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27687109 27687109 PRJNA849822_P_NODE_23104_length_301_cov_1.710526_g22930_i0 PRJNA849822 23104 301 1.710526 5.14868326 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 84.7 1.29e-16   NR MCX6580085.1 2052149 g22930 i0 45.3 0.946843853820598 95 50 92.7 1 296 18 116 210 MCX6580085.1 GTP-binding protein [Candidatus Aminicenantes bacterium] diamond 285 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29557739 29557739 PRJNA849822_P_NODE_33730_length_253_cov_0.866667_g33556_i0 PRJNA849822 33730 253 0.866667 2.19266751 Pseudomonadati 3379134 Bacteria Bacteria 60.5 2.15e-9   NR MBP1768184.1 2052149 g33556 i0 45.5 1.56521739130435 66 36 78.3 0 2 199 25 90 MBP1768184.1 domain S-box [Candidatus Aminicenantes bacterium] diamond 396 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;