RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849822", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28168673 28168673 PRJNA849822_P_NODE_35545_length_251_cov_0.876404_g35371_i0 PRJNA849822 35545 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 72 5.66e-13   NR NJK50502.1 2044595 g35371 i0 48.1 2.71314741035857 81 37 96.8 2 248 6 149 224 NJK50502.1 pirin family protein [Candidatus Altimarinota bacterium] diamond 681 72 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29802152 29802152 PRJNA849822_P_NODE_3391_length_882_cov_1.709518_g3236_i0 PRJNA849822 3391 882 1.709518 15.07794876 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 138 3.75e-36   NR MCT4592035.1 2044595 g3236 i0 42.1 0.540816326530612 159 89 54.1 2 787 311 4 159 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 477 138 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;