RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA849646", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA849646 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25064465 25064465 PRJNA849646_P_NODE_34300_length_245_cov_3.965116_g34182_i0 PRJNA849646 34300 245 3.965116 9.7145342 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 422 1.46e-113   NTclustered gi|269099254|gb|CP001818.1| 525903 g34182 i0 98.745 0.975510204081633 239 0 98 3 7 245 646468 646703 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 239 422 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans
27212765 27212765 PRJNA849646_P_NODE_33662_length_246_cov_1.780347_g33544_i0 PRJNA849646 33662 246 1.780347 4.37965362 Pyramidobacter sp. 1943581 Bacteria Bacteria 60.5 9.66e-9   NR MBP5211941.1 1943581 g33544 i0 50 1.9390243902439 42 20 50 1 3 125 180 221 MBP5211941.1 SH3 domain-containing protein [Pyramidobacter sp.] diamond 477 60.5 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter sp.
31928093 31928093 PRJNA849646_P_NODE_35557_length_244_cov_1.801170_g35439_i0 PRJNA849646 35557 244 1.80117 4.3948548 Pyramidobacter 638847 Bacteria Bacteria 142 7.679999999999999e-38   NR WP_078015830.1 1943580 g35439 i0 80 1.9672131147541 80 16 98.4 0 5 244 144 223 WP_078015830.1 glutamine-hydrolyzing GMP synthase [Pyramidobacter sp. C12-8] diamond 480 143 0.993006993006993 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter sp. C12-8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;