contig_metadata
22 rows where bioproject = "PRJNA849646", tax_kingdom = "Fusobacteriati" and tax_phylum = "Fusobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2113789 | 2113789 | PRJNA849646_P_NODE_40022_length_235_cov_2.759259_g39904_i0 | PRJNA849646 | 40022 | 235 | 2.759259 | 6.48425865 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 424 | 3.87e-114 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g39904 | i0 | 99.149 | 392.195744680851 | 235 | 2 | 100 | 0 | 1 | 235 | 70599 | 70833 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 92166 | 424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 3388875 | 3388875 | PRJNA849646_P_NODE_21823_length_265_cov_1.427083_g21705_i0 | PRJNA849646 | 21823 | 265 | 1.427083 | 3.78176995 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g21705 | i0 | 100 | 10.7018867924528 | 265 | 0 | 100 | 0 | 1 | 265 | 2358822 | 2358558 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 2836 | 490 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 4666740 | 4666740 | PRJNA849646_P_NODE_32144_length_248_cov_0.880000_g32026_i0 | PRJNA849646 | 32144 | 248 | 0.88 | 2.1824 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2706056059|gb|CP077188.1| | 76857 | g32026 | i0 | 100 | 99.2983870967742 | 248 | 0 | 100 | 0 | 1 | 248 | 1452613 | 1452860 | Fusobacterium polymorphum strain SB028 chromosome, complete genome | blastn | 24626 | 459 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 8491252 | 8491252 | PRJNA849646_P_NODE_5167_length_310_cov_3.113924_g5049_i0 | PRJNA849646 | 5167 | 310 | 3.113924 | 9.6531644 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 527 | 3.9499999999999986e-145 | NTclustered | gi|2704950824|gb|CP056007.1| | 76857 | g5049 | i0 | 96.774 | 100.103225806452 | 310 | 7 | 100 | 1 | 1 | 310 | 2090308 | 2090614 | Fusobacterium polymorphum strain SB013 chromosome, complete genome | blastn | 31032 | 527 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 9766251 | 9766251 | PRJNA849646_P_NODE_26468_length_256_cov_1.683060_g26350_i0 | PRJNA849646 | 26468 | 256 | 1.68306 | 4.3086336 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 446 | 9.139999999999999e-121 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g26350 | i0 | 98.047 | 193.65234375 | 256 | 5 | 100 | 0 | 1 | 256 | 52893 | 53148 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 49575 | 446 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 10161848 | 10161848 | PRJNA849646_P_NODE_31588_length_248_cov_3.177143_g31470_i0 | PRJNA849646 | 31588 | 248 | 3.177143 | 7.87931464 | Cetobacterium | 180162 | Bacteria | Bacteria | 375 | 1.1699999999999999e-99 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g31470 | i0 | 93.952 | 5 | 248 | 15 | 100 | 0 | 1 | 248 | 1931663 | 1931910 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 1240 | 375 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11437063 | 11437063 | PRJNA849646_P_NODE_29929_length_250_cov_2.180791_g29811_i0 | PRJNA849646 | 29929 | 250 | 2.180791 | 5.4519775 | Leptotrichia | 32067 | Bacteria | Bacteria | 444 | 3.1999999999999986e-120 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g29811 | i0 | 98.795 | 150.808 | 249 | 3 | 99 | 0 | 2 | 250 | 452 | 204 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 37702 | 444 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 12712832 | 12712832 | PRJNA849646_P_NODE_2070_length_378_cov_4.298361_g1952_i0 | PRJNA849646 | 2070 | 378 | 4.298361 | 16.24780458 | Cetobacterium | 180162 | Bacteria | Bacteria | 665 | 0 | NTclustered | gi|2666490175|gb|CP143320.1| | 188913 | g1952 | i0 | 98.417 | 5.01058201058201 | 379 | 5 | 100 | 1 | 1 | 378 | 71312 | 71690 | Cetobacterium somerae strain ceto plasmid p1, complete sequence | blastn | 1894 | 665 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 12712991 | 12712991 | PRJNA849646_P_NODE_42530_length_220_cov_4.632653_g42412_i0 | PRJNA849646 | 42530 | 220 | 4.632653 | 10.1918366 | Fusobacterium | 848 | Bacteria | Bacteria | 405 | 1.2999999999999997e-108 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g42412 | i0 | 100 | 99.4318181818182 | 219 | 0 | 99 | 0 | 2 | 220 | 1504500 | 1504282 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 21875 | 405 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 13986964 | 13986964 | PRJNA849646_P_NODE_10591_length_286_cov_3.807512_g10473_i0 | PRJNA849646 | 10591 | 286 | 3.807512 | 10.88948432 | Fusobacterium | 848 | Bacteria | Bacteria | 512 | 1.01e-140 | NTclustered | gi|586941090|dbj|AB910749.1| | 860 | g10473 | i0 | 98.951 | 292.300699300699 | 286 | 3 | 100 | 0 | 1 | 286 | 289 | 4 | Fusobacterium periodonticum gene for 16S ribosomal RNA, partial sequence | blastn | 83598 | 512 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 14866345 | 14866345 | PRJNA849646_P_NODE_37872_length_241_cov_3.857143_g37754_i0 | PRJNA849646 | 37872 | 241 | 3.857143 | 9.29571463 | Fusobacterium hwasookii | 1583098 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|958159838|gb|CP013334.1| | 1307444 | g37754 | i0 | 99.585 | 65.2863070539419 | 241 | 1 | 100 | 0 | 1 | 241 | 1524609 | 1524849 | Fusobacterium hwasookii ChDC F300, complete genome | blastn | 15734 | 440 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium hwasookii | ||
| 15261288 | 15261288 | PRJNA849646_P_NODE_27912_length_253_cov_2.133333_g27794_i0 | PRJNA849646 | 27912 | 253 | 2.133333 | 5.39733249 | Fusobacterium | 848 | Bacteria | Bacteria | 466 | 6.9199999999999996e-127 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g27794 | i0 | 100 | 99.604743083004 | 252 | 0 | 99 | 0 | 1 | 252 | 1849457 | 1849206 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 15261383 | 15261383 | PRJNA849646_P_NODE_41032_length_231_cov_2.455696_g40914_i0 | PRJNA849646 | 41032 | 231 | 2.455696 | 5.67265776 | Leptotrichia | 32067 | Bacteria | Bacteria | 394 | 2.98e-105 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g40914 | i0 | 97.403 | 492.450216450216 | 231 | 6 | 100 | 0 | 1 | 231 | 2370 | 2140 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 113756 | 394 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 16141131 | 16141131 | PRJNA849646_P_NODE_42413_length_223_cov_4.426667_g42295_i0 | PRJNA849646 | 42413 | 223 | 4.426667 | 9.87146741 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 401 | 1.7099999999999992e-107 | NTclustered | gi|2673502234|gb|CP144257.1| | 76857 | g42295 | i0 | 99.103 | 43.0044843049327 | 223 | 2 | 100 | 0 | 1 | 223 | 357955 | 358177 | Fusobacterium polymorphum strain IOOS_98 chromosome | blastn | 9590 | 401 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 16535998 | 16535998 | PRJNA849646_P_NODE_37793_length_242_cov_0.911243_g37675_i0 | PRJNA849646 | 37793 | 242 | 0.911243 | 2.20520806 | Fusobacterium | 848 | Bacteria | Bacteria | 387 | 5.26e-103 | NTclustered | gi|2705003210|gb|CP084117.1| | 851 | g37675 | i0 | 95.473 | 100.061983471074 | 243 | 10 | 100 | 1 | 1 | 242 | 1030863 | 1031105 | Fusobacterium nucleatum strain KCOM3486 chromosome, complete genome | blastn | 24215 | 387 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16536049 | 16536049 | PRJNA849646_P_NODE_6673_length_307_cov_3.649573_g6555_i0 | PRJNA849646 | 6673 | 307 | 3.649573 | 11.20418911 | Fusobacterium | 848 | Bacteria | Bacteria | 226 | 1.59e-54 | NTclustered | gi|2704998788|gb|CP077147.1| | 851 | g6555 | i0 | 93.96 | 8.55374592833876 | 149 | 9 | 95 | 0 | 159 | 307 | 1463253 | 1463105 | Fusobacterium nucleatum strain KCOM2373 chromosome, complete genome | blastn | 2626 | 226 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 18689549 | 18689549 | PRJNA849646_P_NODE_28055_length_253_cov_1.711111_g27937_i0 | PRJNA849646 | 28055 | 253 | 1.711111 | 4.32911083 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g27937 | i0 | 100 | 379.466403162055 | 253 | 0 | 100 | 0 | 1 | 253 | 2288638 | 2288386 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 96005 | 468 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 19084875 | 19084875 | PRJNA849646_P_NODE_34235_length_246_cov_0.890173_g34117_i0 | PRJNA849646 | 34235 | 246 | 0.890173 | 2.18982558 | Cetobacterium | 180162 | Bacteria | Bacteria | 350 | 7.04e-92 | NTclustered | gi|2666491163|gb|CP143323.1| | 188913 | g34117 | i0 | 92.276 | 5 | 246 | 19 | 100 | 0 | 1 | 246 | 11349 | 11594 | Cetobacterium somerae strain ceto plasmid p4, complete sequence | blastn | 1230 | 350 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 21635500 | 21635500 | PRJNA849646_P_NODE_717_length_580_cov_4.069034_g602_i0 | PRJNA849646 | 717 | 580 | 4.069034 | 23.6003972 | Fusobacterium | 848 | Bacteria | Bacteria | 1020 | 0 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g602 | i0 | 98.448 | 480.012068965517 | 580 | 8 | 100 | 1 | 1 | 580 | 1602875 | 1603453 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 278407 | 1020 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 25064294 | 25064294 | PRJNA849646_P_NODE_21120_length_266_cov_2.051813_g21002_i0 | PRJNA849646 | 21120 | 266 | 2.051813 | 5.45782258 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 481 | 2.62e-131 | NTclustered | gi|1276705688|gb|CP024698.1| | 2663009 | g21002 | i0 | 99.248 | 12 | 266 | 2 | 100 | 0 | 1 | 266 | 299409 | 299674 | Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome | blastn | 3192 | 481 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 30623436 | 30623436 | PRJNA849646_P_NODE_33413_length_246_cov_3.670520_g33295_i0 | PRJNA849646 | 33413 | 246 | 3.67052 | 9.0294792 | Fusobacterium sp. | 68766 | Bacteria | Bacteria | 43.5 | 0.0204 | NR | WP_320949167.1 | 68766 | g33295 | i0 | 47.8 | 1.1219512195122 | 46 | 24 | 56.1 | 0 | 4 | 141 | 343 | 388 | WP_320949167.1 site-specific DNA-methyltransferase [Fusobacterium sp.] | diamond | 276 | 43.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 30655089 | 30655089 | PRJNA849646_P_NODE_26593_length_256_cov_1.404372_g26475_i0 | PRJNA849646 | 26593 | 256 | 1.404372 | 3.59519232 | Cetobacterium sp. 2G large | 2759680 | Bacteria | Bacteria | 176 | 2.6799999999999996e-54 | NR | WP_185891584.1 | 2759680 | g26475 | i0 | 98.8 | 0.9609375 | 82 | 1 | 96.1 | 0 | 247 | 2 | 2 | 83 | WP_185891584.1 YbhB/YbcL family Raf kinase inhibitor-like protein [Cetobacterium sp. 2G large] | diamond | 246 | 176 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium sp. 2G large |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;