contig_metadata
14 rows where bioproject = "PRJNA849646", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4666876 | 4666876 | PRJNA849646_P_NODE_4744_length_310_cov_3.438819_g4626_i0 | PRJNA849646 | 4744 | 310 | 3.438819 | 10.6603389 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 85.5 | 7.32e-17 | NR | HKG95214.1 | 2026741 | g4626 | i0 | 81.3 | 0.464516129032258 | 48 | 9 | 46.5 | 0 | 308 | 165 | 265 | 312 | HKG95214.1 serine/threonine-protein kinase [Gemmatimonadaceae bacterium] | diamond | 144 | 85.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 17416475 | 17416475 | PRJNA849646_P_NODE_28994_length_251_cov_2.073034_g28876_i0 | PRJNA849646 | 28994 | 251 | 2.073034 | 5.20331534 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 163 | 1.01e-35 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g28876 | i0 | 78.571 | 1.00398406374502 | 252 | 50 | 99 | 4 | 1 | 250 | 1459317 | 1459566 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 252 | 163 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17416493 | 17416493 | PRJNA849646_P_NODE_30534_length_250_cov_0.870056_g30416_i0 | PRJNA849646 | 30534 | 250 | 0.870056 | 2.17514 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 351 | 1.99e-92 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g30416 | i0 | 92 | 98.988 | 250 | 20 | 100 | 0 | 1 | 250 | 4458507 | 4458258 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 24747 | 351 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 19964507 | 19964507 | PRJNA849646_P_NODE_14196_length_279_cov_2.781553_g14078_i0 | PRJNA849646 | 14196 | 279 | 2.781553 | 7.76053287 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 339 | 1.7599999999999998e-88 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g14078 | i0 | 89.051 | 11.2329749103943 | 274 | 28 | 98 | 2 | 1 | 273 | 3488306 | 3488578 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 3134 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 21240171 | 21240171 | PRJNA849646_P_NODE_18817_length_270_cov_3.406091_g18699_i0 | PRJNA849646 | 18817 | 270 | 3.406091 | 9.1964457 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 311 | 3.7e-80 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g18699 | i0 | 87.546 | 29.2555555555556 | 273 | 29 | 100 | 5 | 1 | 270 | 782769 | 783039 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 7899 | 311 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 22514835 | 22514835 | PRJNA849646_P_NODE_14578_length_279_cov_1.339806_g14460_i0 | PRJNA849646 | 14578 | 279 | 1.339806 | 3.73805874 | Roseisolibacter sp. H3M3-2 | 3031323 | Bacteria | Bacteria | 166 | 3.619999999999999e-48 | NR | WP_275836742.1 | 3031323 | g14460 | i0 | 92.5 | 1 | 93 | 7 | 100 | 0 | 1 | 279 | 153 | 245 | WP_275836742.1 phosphate ABC transporter substrate-binding protein PstS, partial [Roseisolibacter sp. H3M3-2] | diamond | 279 | 166 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Roseisolibacter | Roseisolibacter sp. H3M3-2 | |
| 26865332 | 26865332 | PRJNA849646_P_NODE_18821_length_270_cov_3.304569_g18703_i0 | PRJNA849646 | 18821 | 270 | 3.304569 | 8.9223363 | Gemmatirosa sp. | 2510638 | Bacteria | Bacteria | 67 | 1.12e-10 | NR | MBV9880697.1 | 2510638 | g18703 | i0 | 50 | 1 | 90 | 40 | 98.9 | 3 | 1 | 267 | 158 | 243 | MBV9880697.1 universal stress protein [Gemmatirosa sp.] | diamond | 270 | 67 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa sp. | |
| 27979158 | 27979158 | PRJNA849646_P_NODE_14145_length_279_cov_3.820388_g14027_i0 | PRJNA849646 | 14145 | 279 | 3.820388 | 10.65888252 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 87.8 | 2.27e-18 | NR | WP_025411612.1 | 861299 | g14027 | i0 | 84.9 | 1.13978494623656 | 53 | 8 | 57 | 0 | 120 | 278 | 6 | 58 | WP_025411612.1 histidine kinase dimerization/phospho-acceptor domain-containing protein [Gemmatirosa kalamazoonensis] | diamond | 318 | 87.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 28286406 | 28286406 | PRJNA849646_P_NODE_36706_length_243_cov_0.905882_g36588_i0 | PRJNA849646 | 36706 | 243 | 0.905882 | 2.20129326 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 167 | 3.62e-47 | NR | HET9727723.1 | 2448054 | g36588 | i0 | 97.5 | 1.96296296296296 | 79 | 2 | 97.5 | 0 | 241 | 5 | 256 | 334 | HET9727723.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Gemmatimonadales bacterium] | diamond | 477 | 167 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29454471 | 29454471 | PRJNA849646_P_NODE_16090_length_276_cov_1.344828_g15972_i0 | PRJNA849646 | 16090 | 276 | 1.344828 | 3.71172528 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 119 | 1.34e-30 | NR | HEY0971603.1 | 2448054 | g15972 | i0 | 68.2 | 2.72826086956522 | 85 | 27 | 92.4 | 0 | 255 | 1 | 127 | 211 | HEY0971603.1 TIGR01777 family oxidoreductase [Gemmatimonadales bacterium] | diamond | 753 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30023517 | 30023517 | PRJNA849646_P_NODE_41411_length_229_cov_2.884615_g41293_i0 | PRJNA849646 | 41411 | 229 | 2.884615 | 6.60576835 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 116 | 4.46e-29 | NR | HUQ19331.1 | 2026741 | g41293 | i0 | 78.1 | 2.882096069869 | 73 | 16 | 95.6 | 0 | 10 | 228 | 298 | 370 | HUQ19331.1 MFS transporter [Gemmatimonadaceae bacterium] | diamond | 660 | 116 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30813152 | 30813152 | PRJNA849646_P_NODE_26634_length_255_cov_8.714286_g26516_i0 | PRJNA849646 | 26634 | 255 | 8.714286 | 22.2214293 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.1 | 0.0282 | NR | MEO7965368.1 | 2026741 | g26516 | i0 | 46.2 | 0.611764705882353 | 52 | 28 | 61.2 | 0 | 255 | 100 | 194 | 245 | MEO7965368.1 DotU family type IV/VI secretion system protein [Gemmatimonadaceae bacterium] | diamond | 156 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30853056 | 30853056 | PRJNA849646_P_NODE_26294_length_256_cov_2.377049_g26176_i0 | PRJNA849646 | 26294 | 256 | 2.377049 | 6.08524544 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 47.4 | 9.64e-4 | NR | MFL5580492.1 | 2026741 | g26176 | i0 | 58.3 | 1.76953125 | 36 | 15 | 42.2 | 0 | 110 | 3 | 10 | 45 | MFL5580492.1 acyltransferase family protein [Gemmatimonadaceae bacterium] | diamond | 453 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32521284 | 32521284 | PRJNA849646_P_NODE_15819_length_276_cov_2.103448_g15701_i0 | PRJNA849646 | 15819 | 276 | 2.103448 | 5.80551648 | Gemmatimonadetes bacterium T265 | 2839016 | Bacteria | Bacteria | 117 | 1.77e-29 | NR | GJG87985.1 | 2839016 | g15701 | i0 | 65.6 | 0.978260869565217 | 90 | 31 | 97.8 | 0 | 7 | 276 | 39 | 128 | GJG87985.1 membrane protein [Gemmatimonadetes bacterium T265] | diamond | 270 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium T265 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;