RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849646", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA849646 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13591915 13591915 PRJNA849646_P_NODE_27911_length_253_cov_2.133333_g27793_i0 PRJNA849646 27911 253 2.133333 5.39733249 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 142 1.33e-39   NR MBL7649078.1 2030809 g27793 i0 94 0.99604743083004 84 5 99.6 0 252 1 37 120 MBL7649078.1 ABC transporter permease [Candidatus Hydrogenedentota bacterium] diamond 252 142 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28002657 28002657 PRJNA849646_P_NODE_33145_length_247_cov_0.885057_g33027_i0 PRJNA849646 33145 247 0.885057 2.18609079 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 162 4.16e-44   NR MBL7648403.1 2030809 g33027 i0 96.3 0.995951417004049 82 3 99.6 0 247 2 238 319 MBL7648403.1 circularly permuted type 2 ATP-grasp protein [Candidatus Hydrogenedentota bacterium] diamond 246 162 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;